YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109479698, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGGKKVVPS GSSGASLNAA TAATTAAAAA ATAAAAAAAH SGITCLETTE GASAQRDEEP  60
   61 EEEGDEDLRD GGVPFFINRG GLPVDEATWE RMWKHVAKIH PDGEKVALRI RGATDLPKIP 120
  121 IPSVPTFQPT TPIPERLEAV QRYIRELQYN HTGTQFFEIK KSRPLTGLMD LAKEMTKEAL 180
  181 PIKCLEAVIL GIYLTNSMPT LERFPISFKT YFSGNYFRHI VLGVNFGGRY GALGMSRRED 240
  241 LMYKPPAFRT LSELVLDYEA AYGRCWHVLK KVKLGQCVSH DPHSVEQIEW KHSVLDVERL 300
  301 GREDFRKELE RHARDMRLKI GKGTGPPSPT KDRKKDVSSP QRAQSSPHRR NSRSERRPSG 360
  361 EKKPAEPKAM PDLSGYQIRV

Type	Start	End	Confidence
Signal Peptide	1	38	0.96
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	380	0.99