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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109501964
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGAARMLSE AGRLPLRATP AVAAAAAAAA AAAAAAAPPP PHTPRVAGLD EWPQQRRGRR  60
   61 GEEEEKAAAA EKVAVFVVSL LRAPEAAATA VVVGRVCEGA RVPARPARGD EAAAARMMMC 120
  121 AATASPAAAS SGPGGDGFFA AATISSSPAP GALFMPVPDG SVAASGLGLG LPATDSRGQY 180
  181 QLLLSGRALA DRYRRIYTTA LSDRDQAGSS TGYPASRNKK ILNKKKLKRK QKSKSKVKTR 240
  241 SKSENLENTV IIPDIKLHSN PSAFNIYCNV RHCVLEWQKK EASLAAASRN SVQSGESDSD 300
  301 EEEESRELPI KLPKIIEVGL CEVFELIKET RFSHPSLCLR SLQALLNVLQ GQQPEGLQSE 360
  361 PPEVLESLFQ LLLEITVRST GVNDSTGQSL TALSCACLFS LVASWGETGR TLQAISAILT 420
  421 NNGSHACQTI QVPTILNSLQ RSVQAVLVGK IQVQDWFSNG IKKAALMHKW PLKEISVDED 480
  481 DQCLLQNDGF FLYLLCKDGL YKIGSGYSGT VRGHIYNSTS RIRNRKEKKS WLGYAQGYLL 540
  541 YRDVNNHSMT AIRISPETLE QDGTVMLPDC HTEGQNILFT DGEYINQIAA SRDDGFVVRI 600
  601 FATSTEPVLQ QELQLKLARK CLHACGISLF DLEKDLHIIS TGFDEESAIL GAGREFALMK 660
  661 TANGKIYYTG KYQSLGIKQG GPSAGKWVEL PITKSPKIVH FSVGHDGSHA LLVAEDGSVF 720
  721 FTGSASKGED GESAKSRRQS KPYKPKKIIK MEGKIVVCTA CNNGSSSVIS KDGELYMFGK 780
  781 DAIYSDSSSL VSDLKGHFVT QVAMGKAHTC VLMKNGEVWT FGVNNKGQCG RDTGAMNQGG 840
  841 KGFGVENMAT AMDEDLEEEL DEKDEKSMMC PPGMHKWKLE QCMVCTVCGD CTGYGASCVS 900
  901 SGRPDRVPGG ICGCGSGESG CAVCGCCKAC ARELDGQEAR QRGILDAVKE MIPLDLLLAV 960
  961 PVPGVNIEEH LQLRQEEKRQ RVIRRHRLED GRGPLVFAGP IFMNHREQAL ARLRSHPAQL1020
 1021 KHKRDKHKDA SGERGEKDAS KVTTYPPGSV RFDCEVRAVQ VSCGFHHSVV LMENGDVYTF1080
 1081 GYGQHGQLGH GDVNSRGCPT LVQALPGPST QVTAGSNHTA VLVMDGQVFT FGSFSKGQLG1140
 1141 RPILDVPYWN AKPAPMPNIG SKYGRKATWI GASGDQTFLR IDEALINSHV LATSEIFASK1200
 1201 HIIGLVPASI SEPPPFKCLL INKVDGSCKT FNDSEQEDLQ GFGVCLDPVY DVLWRFRPST1260
 1261 RELWCYNAVV ADARLPSATD MQSSCCILSP ELALPTGSRA LTTRSHAALH ILGCLDTLAA1320
 1321 MQDLKMGIAS IEEETQAVMK VYSKEDYSIV NRFESHGGGW GYSAHSVEAI RFSADTDILL1380
 1381 GGLGLFGGRG EYTAKIKLFE LGPDGGDHET DGDLLAETDV LAYDCAAREK YAMMFDEPVL1440
 1441 LQAGWWYVAW ARVSGPSSDC GSHGQASITT DDGVIFQFKS SKKSNNGTDV NAGQIPQLLY1500
 1501 RLPTCDGSTS KGKQQTSEPV HILKRSFART VSVECFESLL SILHWSWTTL VLGVEELRGL1560
 1561 KGFQFTATLL DLERLRFVGT CCLRLLRVYT CEIYPVSAVG KAVVEETSKL AECIGKTRTL1620
 1621 LRKILSEGVD HCMVKLDNDP QGYLSQPLSL LESVLQECHN TFTACFHSFY PTPALQWACL1680
 1681 CDLLNCLDQE ANFKTSSSRL LAAVMSALCH TSVKLTSLFP IAYDGEVLLR SIVKQVSTEN1740
 1741 ESTLVHRFPL LVGHMEKLSQ SEENISGMTS FREVLEKMLV IVVLPVRNSL RRESELFSSH1800
 1801 LVSNTCGLLA SIVSELTASA LGSEVDGLNS LHSVKASANR FTKTSQGRSW NTGNGSPDAI1860
 1861 CFAVDKPGIV VVGFSVYGGG GIHEYELEVL VDDSEHSGDS THSHRWTSLE LVKGTYTTDD1920
 1921 SPSDIAEIRL DKVVPLKENV KYAVRLRNYG SRTANGDGGM TTVQCPDGVT FTFSTCSLSS1980
 1981 NGTNQTRGQI PQILYYRSEF DGDLQSQLVS KANEEDKNCS RALSVVSTVV RAAKDLLHRA2040
 2041 LAVDADDIPE LLSSSSLFSM LLPLIIAYIG PVAAAIPKVA VEVFGLVQQL LPSVAVLNQK2100
 2101 YAPPAFNPNQ STDSTTGNQP EQGLSACTTS NHYAVIESEH PYKPACVMHY KVTFPECVRW2160
 2161 MTIEFDPQCG TAQSEDVLRL LTPVRTIQNA GYGAKVTSAH ENLNSWIELK KYSGSSGWPT2220
 2221 MVLVLPGNEA LFSLETASDY VKDDKASFYG FKCFAIGYEF SPGPDEGVIQ LEKELANLGG2280
 2281 VCAAALMKKD LALPIGNELE EDLEILEEAA LQVCKTHSGI LGKGLALSHS PTILEALEGN2340
 2341 LPLQIQSNEQ SFLDDFIACV PGSSGGRLAR WLQPDSYADP QKTSLILNKD DIRCGWPTTI2400
 2401 TVQTKDQYGD VVHVPNMKVE VKAVPVSQKK TSLQQEQVKK SQRVPGSPAA AAAASCTTDM2460
 2461 TFGGLASPKL DVSYEPMIVK EARYIAITMM KVYENYSFEE LRFASPTPKR PSENMLIRVN2520
 2521 NDGTYCANWT PGAIGLYTVH VTIDGIEIDA GLEVKVKDPP KGMIPPGTQL VKPKADPQPN2580
 2581 KIRKFVAKDS AGLRIRSHPS LQSEQIGIVK VNGTITFIDE IHNDDGVWLR LNEETIRKYV2640
 2641 PNMNGYTEAW CLSFNQHLGK SLLVPVDNIF NASQGVRDLD VLSWTSKAFF PQEPKTTTDD2700
 2701 FFKDVNTCCP QEAAVRERDH PFLRGGPGMY KVVKTGPSGH NIRSCPNLRG IPIGMLVLGN2760
 2761 KVKAVGEVTS AEGTWVQLDK NSMVEFCESD EGEAWSLARD RGGNQYLRHE DEQVLLDQNS2820
 2821 QTPPPSPFSV QAFSKGASCS AQGFDYGLGN NKGDQLSAIL NSIQSRPNLP APSIFDQAAK2880
 2881 PPSSLVHSPF VFGQPLSFQQ RQLQSDRGTV STSSRPVSTS AKSELPSKNS RSVKPDGRVS2940
 2941 RTTADQKKPR GTEGLSASES LMLKSDAAKL RSDSHSRSLS PNHNTLQTLK SDGRVSSSFR3000
 3001 AESPGPGSRS SSPKPKTLPT PRSSPSGASS PRSSSPQDKN LPQKSTAPAK TKLDPPRERS3060
 3061 KSDSYTLDPD TLRKKKMPLT EPLRGRSTSP KPKPVPKDPK GSPGSENRAP SPHVVQENLH3120
 3121 SEVVEVCTSS TLKTNGVTDS TCDDSNDFKS VDEGSNKVHF SIGKAPLKDE QEMRASPKIS3180
 3181 RKCANRHTRP KKEKSNFLFK GDGAKSLEPA KQAMSPSVAE CARAVFASFL WHEGIVHDAM3240
 3241 ACSSFLKFNP ELSKEHAPIR SSLNSQPPTE EKEIKLKNRH SLEISSALNM FNISPHGPDI3300
 3301 SKMGSINKNK VLSMLKEPPL HEKCEDGKSE ATFEMSMHHS VKSRSPLPLT LQHLVAFWED3360
 3361 ISLATIKAAS QNMIFPSPGS CAVLKKKECE KENKKTKKEK KKKEKTEIRP RGNLFGEMAQ3420
 3421 LAVGGPEKDT ICELCGESHP YPVTYHMRQA HPGCGRYAGG QGYNSIGHFC GGWAGNCGDG3480
 3481 GMGGSTWYLV CDRCREKYLR EKQAAAREKV KQSRRKPMQV KTPRALPTME AHQVIKANAL3540
 3541 FLLSLSSAAE PSILCYHPAK PFQSQLPIVK EGVSEALPVK MPCLYLQTLA RHHHENFVGY3600
 3601 QDDNLFQDEM RYLRSTSVPA PYISVTPDAS PNVFEEPESN MKSMPPSLET SPITDTDLAK3660
 3661 RTVFQRSYSV VASEYDKQHS ILPARVKAIP RRRVNSGDTV GSSLLRHPSP ELSRLISAHS3720
 3721 SLSKGERNFQ WPVLAFVIQH HDLEGLEIAM KQALRKSACR VFAMEAFNWL LCNVIQTTSL3780
 3781 HDILWHFVAA LTPSPVEAEE DEDEDNKSSK ENAEQEKDTR VCEHPLSDIV IAGEAAHPLP3840
 3841 HTFHRLLQTI SDLMMSLPSG SSLQQMALRC WSLKFKQSDH QFLHQSNVFH HINNILSKSD3900
 3901 DGDSEESFSI SIQSGFEAMN QELCIVMCLK DLTSIVDIKT SSRPAMIGSL TDGSTETFWE3960
 3961 SGDEDKNKTK TITINCVKGI NARYVSVHVD NSRDLGNKVT SMTFLTGKAV EDLCRIKQVD4020
 4021 LDSRHIGWVT SELPGGDNHI IKIELKGPEN TLRVRQVKVL GWKDGESTKI AGQISASVAQ4080
 4081 QRSCEAETLR VFRLITSQVF GKLISGDAEP TPEQEEKALL SSPEGEEKAT SDADLKEHMV4140
 4141 GIIFSRSKLT NLQKQVCAHI VQAIRMEATR VREEWEHAIS SKENANSQPS DEDASSDAYC4200
 4201 FELLSMVLAL SGSNVGRQYL AQQLTLLQDL CSLLHTASPR VQRQVTSLLR RVLPEVTPNR4260
 4261 LASIIGVKSL PPADISDIIH STEKGDWNKL GILDMFLGCI AKALTVQLKA KGTTITGTAG4320
 4321 TTVGKGVTTV TLPMIFNSSY LRRGESHWWM KGSTPTQISE IIIKLIKDMA AGHLSEAWSR4380
 4381 VTKNAIAETI IALTKMEEEF RSPVRCIATT RLWLALASLC VLDQDHVDRL SSGRWMGKDG4440
 4441 QQKQMPMCDN HDDGETAAII LCNICGNLCT DCDRFLHLHR RTKTHQRQVF KEEEEAIKVD4500
 4501 LHEGCGRTKL FWLMALADSK TMKAMVEFRE HTGKPTTSSS EACRFCGSRS GTELSAVGSV4560
 4561 CSDADCQEYA KIACSKTHPC GHPCGGVRNE EHCLPCLHGC DKNATTLKQD ADDMCMICFT4620
 4621 EALSAAPAIQ LDCSHVFHLQ CCRRVLENRW LGPRITFGFI SCPICKNKIN HIVLKDLLDP4680
 4681 IKELYEDVRR KALMRLEYEG LHKSEAITTP GVRFYNDPAG YAMNRYAYYV CYKCRKAYFG4740
 4741 GEARCDAEAG QGDDYDPREL ICGACSDVSR AQMCPKHGTD FLEYKCRYCC SVAVFFCFGT4800
 4801 THFCNACHDD FQRMTSIPKE ELPHCPAGPK GKQLEGTECP LHVVHPPTGE EFALGCGVCR4860
 4861 NAHTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle