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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109501819, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNKAMYLHT VSDRDNGSIF EEPFDGRSLS KLNLCEDGPC HKRRAGGCCT QLGSLSALKH  60
   61 AVLGLYLLVF LTLVGVFILA VSRPRSSPDD LKALTRNINR LNESFRDMQL RLLQAPLQAD 120
  121 LTEQVWKVQD ALQNQTDSLL ALAGLVQRLE GTLWGLHAQA AQTEQAVALL RDRTGQQSDS 180
  181 AQLELYQLQV ESNRSQLLLQ RHAGLLDGLA HRVGVLGEEL ADVGGALRGL NHSLSYDVAL 240
  241 HSTWLQDLQV LVSNASADTR RMRLVHMDME MQLKQELATL NVVTEDLRLK DWEHSIALRN 300
  301 ITLAKGPPGP KGDQGNEGKE GKPGSPGLPG SRGLPGERGD PGMPGPKGDD GKLGATGPMG 360
  361 MRGFKGERGP KGEKGERGER AGDMDFTMIR LVNGSGPHQG RVEVFHDRRW GTVCDDGWDK 420
  421 KDGDVVCRML GFHSVEEVHR TARFGQGTGR IWMDDVNCKG TESSIFHCQF SKWGVTNCGH 480
  481 AEDAGVTCTA L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle