YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109501779
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPVSVSLF QSRPCRLTMR IWWLLLVMDA GSVFSQDTCR QGHSGIPGTP GHNGLPGRDG  60
   61 RDGAKGDKGD TGEPGHPGGP GKDGIRGEKG EPGADGRVEA KGIKGDPGSR GSPGKHGPKG 120
  121 SIGPTGEQGL PGETGPQGQK GDKGEVGPTG PEGLMGSTGP LGPKGLPGPV GPIGKPGPRG 180
  181 EAGPMGPQGE PGVRGMRGWK GDRGEKGKVG EAPMVPKSAF TVGLTVISKF PPPDVPIKFD 240
  241 KILYNEQNHY NVATGKFTCH VAGVYYFTYH ITVFSRNVQV SLVKNGVKVL HTKDGYMSSE 300
  301 DQASGGIVLE LKLGDEVWMQ VTGGERFNGL FADEDDDTTF TGFLLFSSS

Type	Start	End	Confidence
Signal Peptide	1	35	0.88
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	349	0.99