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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85679499
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQTASVSHH IKCQPSKTVK ELGSNSPPQR NWKGIAIALL VILVVCSLIT MSVILLTPDE  60
   61 LTNSSETRLS LEDLFRRDFV LHDPEARWIN DTDVVYKSEN GHVIKLNIET NATTLLLENT 120
  121 TFVTFKASKY SVSPDLKYVL LAYDVKQIFH YSYTASYVIY NIHTREVWEL NPPEVEDSVL 180
  181 QYAAWGVQGQ QLIYIFENNI YYQPDIKSSS LRLTSSGKEG IIFNGIADWL YEEELLHSHI 240
  241 AHWWSPDGER LAFLMINDSL VPNMVIPRFT GALYPKGKQY PYPKAGQMNP TVKLYVVNLY 300
  301 GPTHTLELMP PDSFKSREYY ITMVKWVSNT KTVVRWLNRP QNISILTVCE TTTGACSRKY 360
  361 EMTSDTWLSK QNEEPVFSRD GSKFFMTVPV KQGGRGEFHH IAMFLVQSKS EQITVRHLTS 420
  421 GNWEVIKILA YDETTQKIYF LSTESSPRGR QLYSASTEGL LNRQCISCNF MKEQCTYFDA 480
  481 SFSPMNQHFL LLCKGPGVPV VSLHSMENPA KYFILESNSM LKEAILKKKI VKSEIKMLHI 540
  541 DDYELPLQLS FPKDFTDRNQ YALLLIMDEE PGGQLVTDKF HIDWDSVLVD TDNVITARFD 600
  601 GRGSGFQGLK ILQEIHRRLG SVEVKDQVAA VKFLLKQPYI DSKRLSIFGK GYGGYIASMI 660
  661 LKSDEKLFKC GSVIAPIIDL KLYASAFSER YLGVPSREES TYQASSVLHN IHGLKEENIL 720
  721 IIHGTADTKV HFQHSAELIK HLIKAGVNYT MQVYPDEGHN VSEKSKYHLY STILRFFSDC 780
  781 LKEEIPVLPQ EPEEDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle