YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|102139993
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPLLLCSIV VIVLAVTSSN MSIISSFQTM FLIFPTVPSA NRTGPAFVES QLASAAPPPV  60
   61 GSRIPRLAYL ISGSKGDLDR LWRTLRALYH PRNIYVVHLD LESPASERLE LALRVANDTV 120
  121 LSTVGNVHVV EKANMVTYRG PTMVASTLHA CAILLKESKE WDWFINLSAS DYPLVTQDDI 180
  181 LHVFSSLPRN ISFVEHTSRL GWKEGQRAKP LMVDPGLYMT RKTDVFWVSQ KREVPTAFKL 240
  241 FTGSAWVALT REFAEFCVWG WDNLPRILLM YYTNFVSSPE GYFQTVICNA PEFSVTVANH 300
  301 DLHYISWDVP PKQHPHTLSM DDLPKMIGSN APFARKFKRD DPVLDQIDAE LLGRAKGSFV 360
  361 PGGWCAGAPL CTEIGDPTRL QPGPGAERLA ALMDVIVRSK KFTQNQCR

Type	Start	End	Confidence
Signal Peptide	1	19	0.97
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	408	0.99