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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507239, gi...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALGGVQRV DVPGQHAIIF ASIWAPLLLL LSGIHRSSLA GSGGPDAGGA AEASVRGRSR  60
   61 LLEAAEEQAR RGGGEAVAAL VRFQAPPRVR RCAFGRVQGA SLQPGSTGRM GLPALEFSDC 120
  121 CLDSPHFRET LKSHEAELDK TNKFIKELIK DGKSLISALK NLSSAKRKFA DSLNEFKFQC 180
  181 IGDAETDDEM CIARSLQEFA TVLRNLEDER SRMIENASEV LITPLEKFRK EQIGAAREAK 240
  241 KKYDKETEKY CGTLEKHLNL SSKKKESQLQ EADSQVDLVR QHFYEVSLEY VFKVQEVQER 300
  301 KMFEFVEPLL AFLQGLFTFY HHGYELAKDF GDFKTQLTIS IQNTRNRFEG TRSEVESLMK 360
  361 KMKENPLEHK TISPYTMEGY LYVQEKRHFG TSWVKHYCTY QRDSKQITMV PFDQKSGGKG 420
  421 GEDESVTLKS CTRRKTDSIE KRFCFDVEAV DRPGVITMQA LSEEDRRLWM EAMDGREPVY 480
  481 NSNKDSQSEG TAQLDSIGFS IIRKCIHAVE TRGINEQGLY RIVGVNSRVQ KLLSVLMDPK 540
  541 AASETETDIC AEWEIKTVTS ALKTYLRMLP GPLMMYQFQR SFIKAAKLEN QETRVSEIHS 600
  601 LVHRLPEKNR QMLQLLMNHL ANVANNHKQN LMTVANLGVV FGPTLLRPQE ETVAAIMDIK 660
  661 FQNIVIEILI ENHEKIFNTV PDVPLTNAQL HLSRKKSSDS KPPSCSERPL TLFHAVPSTE 720
  721 KQEQRNSIIN SSLESVSSSA NSILNSSSSL QPNMNFSDPS LDVVKPTRPN SLPPNPSPTS 780
  781 PLSPSWPMFS APSSPMPTSS TSSDSSPIRS VAGFVWFSVA AVVLSLAWSS LHAVFSLLVN 840
  841 FVPCHPNLHL LFDRPEEVVH EDSSTPFRKA KALYACKAEH DSELSFTAGT VFDNVHPSQE 900
  901 PGWLEGTLNG KTGLIPENYV EFL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle