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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507019, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEDSGKRGN TMAERRQLFA EMRAQDLDRI RLSTYRTACK LRFVQKKCNL HLVDIWNVIE  60
   61 ALRENALNNL DPNIELNVAR LEAVLSTMFY QLNKRMPSTH QIHVEQSISL LLNFLLAAFD 120
  121 PEGHGKISVF AVKMALATLC GGKIMDKLRY IFSMISDSSG VMVYGRYDQF LREVLKLPTA 180
  181 VFEGPSFGYT EQSARSCFSQ QKKVTLNGFL DTLMSDPPPQ CLVWLPLLHR LANVENVFHP 240
  241 VECSYCHSES MMGFRYRCQQ CHNYQLCQDC FWRGHAGGSH SNQHQMKEYT SWKSPAKKLT 300
  301 NALSKSLSCA SSREPLHPMF PDQPEKPLNL AHIVDTWPPR PVTSMNDTLF SHSVPSSGSP 360
  361 FITRSMLESS NRLDEEHRLI ARYAARLAAE SSSSQPTQQR SAPDVSFTID ANKQQRQLIA 420
  421 ELENKNREIL QEIQRLRVEH EQASQPTPEK AQQNPTLLAE LRLLRQRKDE LEQRMSALQE 480
  481 SRRELMVQLE GLMKLLKTQG AGSPRSSPSH TISRPIPMPI RSTSACSTPA YTPQDSLTGV 540
  541 GGDVQEAFAQ SKCSLLYCVL LVPAKSFTNT FSSHYKYISE DVASETESTV DSEFSRTQFE 600
  601 DLVPSPTSEK SFLAQIHARK PGYIHGGATS TMHGDMVPED GDPYPQPEDG NYENESVRQL 660
  661 ENELQMEEYL KQKLQDEAYQ RHVSTETRLK HPCPVTETKW RVLFWGFVIV GGFLSLALQI 720
  721 YFWGLF

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