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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507011
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEDSGKRGN TMAERRQLFA EMRAQDLDRI RLSTYRTACK LRFVQKKCNL HLVDIWNVIE  60
   61 ALRENALNNL DPNIELNVAR LEAVLSTMFY QLNKRMPSTH QIHVEQSISL LLNFLLAAFD 120
  121 PEGHGKISVF AVKMALATLC GGKIMDKLRY IFSMISDSSG VMVYGRYDQF LREVLKLPTA 180
  181 VFEGPSFGYT EQSARSCFSQ QKKVTLNGFL DTLMSDPPPQ CLVWLPLLHR LANVENVFHP 240
  241 VECSYCHSES MMGFRYRCQQ CHNYQLCQDC FWRGHAGGSH SNQHQMKEYT SWKSPAKKLT 300
  301 NALSKSLSCA SSREPLHPMF PDQPEKPLNL AHIVPPRPVT SMNDTLFSHS VPSSGSPFIT 360
  361 RSSPPKDSEV EQNKILARAA PAFLKGKGML ESSNRLDEEH RLIARYAARL AAESSSSQPT 420
  421 QQRSAPDVSF TIDANKQQRQ LIAELENKNR EILQEIQRLR VEHEQASQPT PEKAQQNPTL 480
  481 LAELRLLRQR KDELEQRMSA LQESRRELMV QLEGLMKLLK TQGAGSPRSS PSHTISRPIP 540
  541 MPIRSTSACS TPAYTPQDSL TGVGGDVQEA FAQSKCSLLY CVLLVPAKSF TNTFSSHYKY 600
  601 ISEDVASETE STVDSEFSRT QFEDLVPSPT SEKSFLAQIH ARKPGYIHGG ATSTMHGDMV 660
  661 PEDGDPYPQP EDGNYENESV RQLENELQME EYLKQKLQDE AYQRHVSTET RLKHPCPVTE 720
  721 TKWRVLFWGF VIVGGFLSLA LQIYFWGLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle