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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109507009
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEDSGKRGN TMAERRQLFA EMRAQDLDRI RLSTYRTACK LRFVQKKCNL HLVDIWNVIE  60
   61 ALRENALNNL DPNIELNVAR LEAVLSTMFY QLNKRMPSTH QIHVEQSISL LLNFLLAAFD 120
  121 PEGHGKISVF AVKMALATLC GGKIMDKLRY IFSMISDSSG VMVYGRYDQF LREVLKLPTA 180
  181 VFEGPSFGYT EQSARSCFSQ QKKVTLNGFL DTLMSDPPPQ CLVWLPLLHR LANVENVFHP 240
  241 VECSYCHSES MMGFRYRCQQ CHNYQLCQDC FWRGHAGGSH SNQHQMKEYT SWKSPAKKLT 300
  301 NALSKSLSCA SSREPLHPMF PDQPEKPLNL AHIVDTWPPR PVTSMNDTLF SHSVPSSGSP 360
  361 FITRSSPPKD SEVEQNKILA RAAPAFLKGK GIHYSLNVAD RLADEHVLIG LYVNMLRNNP 420
  421 SCMLESSNRL DEEHRLIARY AARLAAESSS SQPTQQRSAP DVSFTIDANK QQRQLIAELE 480
  481 NKNREILQEI QRLRVEHEQA SQPTPEKAQQ NPTLLAELRL LRQRKDELEQ RMSALQESRR 540
  541 ELMVQLEGLM KLLKTQGAGS PRSSPSHTIS RPIPMPIRST SACSTPAYTP QDSLTGVGGD 600
  601 VQEAFAQSKC SLLYCVLLVP AKSFTNTFSS HYKYISEDVA SETESTVDSE FSRTQFEDLV 660
  661 PSPTSEKSFL AQIHARKPGY IHGGATSTMH GDMVPEDGDP YPQPEDGNYE NESVRQLENE 720
  721 LQMEEYLKQK LQDEAYQRHV STETRLKHPC PVTETKWRVL FWGFVIVGGF LSLALQIYFW 780
  781 GLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle