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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109506988
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWHSFRRAA LLLAFLVVLE VNSEFQIQVR DHNAKNGTIK WHSIRRQKRE WIKFAAACRE  60
   61 GEDNSKRNPI AKIHSDCAAN QPVTYRISGV GIDQPPYGIF IINQKTGEIN ITSIVDREVT 120
  121 PFFIIYCRAL NAQGQDLENP LELRVRVMDI NDNPPVFSMT TFLGQIEENS NANTLVMKLN 180
  181 ATDADEPNNL NSLIAFKIVR QEPSEAPMFI INRKTGEIRT MNNFLDREQY SQYSLVVRGS 240
  241 DRDGGADGMS AECECSISIL DVNDNIPYLD QSSYDIKIEE NALHSNLQQF RVIDLDEEYS 300
  301 DNWKAVIFFV TGNEGNWFEI EMNERTNVGT LKVVKPLDYE AMQKLQLSIG VRNVAEFHQS 360
  361 ILSQYTLTVT MITVKVLNVV EGSVFRPGSK TFVVHSRMDA NYRVGEFTAT DLDTGMTSTN 420
  421 VRYVMGNNPE GLLDVDSKTG IITLRNRVTM EQYQRLNKRY EGTILSIDDS LQRTCTGTII 480
  481 IELDGTGWET GGGGGGGGGG DGGGQVTNGY KDTSTEEPQR TTLTRDIDNT DTYQADEDNV 540
  541 HLGPAGIGLL IMGFLVLGLV PFLLICCDCG GAPGGGAGFE PVPECSDGAI HTWAVEGPQP 600
  601 EPHDGITTIC VPQMPPGNAN IIECIDNSGV YTNEYCGREM QDLGGGERTT GFELVDGVKT 660
  661 SAAPEICQEY SGTLRRNSMR ECRDGGLNMN FMESYFCQKA YAYADEDEGR PSNDCLLIYD 720
  721 IEGAGSPTGS VGCCSFIGED LDESFLDTLG PKFKKLADIS LGKEIDSYPD PDPSWPPQST 780
  781 EPICPQRTEP LASGHPPISP HFGTTTVISE NTYPSGPGIQ HPMQIPDPLG YGNVTVRESY 840
  841 TTSGTLKPSV HFHDNRQASN VVVTERVVGP ISGADLHGML EIPDLRDGSN VIVTERVIAP 900
  901 GSSLPTSLTI PNPLETSNVV VTERVIQPTS GMIGNLSMPP ELSSAHNVIV TERVVSGAGV 960
  961 SGVTGTAGIG GVGGIGTMSA GGVGDGGTGM SMGGTATIGH MRSSSDHHFS QAVGSASPSM1020
 1021 ARSRITKYST VQYTK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle