YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109506338, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAKQVFFSV LLFGTAGLLL FMYLQAWVEE HHAGRIEKKR EQKGVSVTTG KIQKQSANQN  60
   61 SEVHIPEDLK KKGGNLLNLE RPTRVLRKSS HSQRENRAPG SATETYQGAK IRVFQKPILM 120
  121 YWPLATQPLN KSSVQGNKWK KAEATQEKRR SFLREFCKKY GGVNDPKANI FHIVSRIYVE 180
  181 DKHKILYCEV PKAGCSNWKR ILMVLNGLAS SAYNISHDTV HYGKHLKTLD SFDLKGVHMR 240
  241 LNTYTKAVFV RDPMERLVSA FRDKFEHPNS YYHPVFGKAI IKKYRPNATA KALNNGSGVK 300
  301 FKEFAYYLLD AQRPVGMDIH WERVSKLCYP CLIDYDFVGK FETLEEDANY FLQLIGAPKE 360
  361 LKFPNFKDRH SSDERTSAHV VRQYLKDLSA AERQLIYNFY HLDYLMFNYT TPHL

Type	Start	End	Confidence
Signal Peptide	1	26	0.94
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	414	0.99