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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109511369, gi...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRAPARAAV WVTRGYQVTT CDGGRLTRVL DRGEEGGAVR EIGGRGRPRA AKALRARGRA  60
   61 LVADPRGVQL PAPRHGDPGQ VCGARVTQPR GAQIQATSSF PGPISSRCLV LATCLLPPNS 120
  121 SRLRSLLPPT VLRFRAYFRP TLLGFRADFR PQFLASQLTS AQQFLVSALT NPHSSRLRSF 180
  181 LPPIALSFGA DFLPIVLGFR ASFSPQFSAS ELTCTQPFLA SELTSARQFW LRSCQTHAYA 240
  241 CCFPFVSLAQ PWIARVGGGE SRGFFSESLS GLNCVILRFT SAAIAAAGGA DRKREAASRP 300
  301 ALPRPANNTG TARTAARAPS QMFRSCSGAH TTFHPRLHSR VLATPSPFSL LGGREGRRHS 360
  361 VRMAKGDPKK PKGKMSAYAF FVQTCREEHK KKNPEVPVNF AEFSKKCSER WKTMSSKEKS 420
  421 KFDEMAKADK VRYDREMKDY GPAKGGKKKK DPNAPKRPPS GFFLFCSEFR PKIKSANPGI 480
  481 SIGDVAKKLG EMWNNLSDSE KQPYMTKAAK LKEKYEKDVA DYKSKGKFDG AKGPAKVARK 540
  541 KVEEEEEEEE EEEEEEEEEE DE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle