YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109514093
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVSFVTEKN IISYPGCLAQ LYFFIIFGAA ECYTLAAMAY DRYLAICNPL LYNATMSYQI  60
   61 YSSLISGVYI FAVFCASVHT GFLTRIQFCK LDVINHFFCD ILPLLKLACS STYIDEMLIL 120
  121 FFGTLNIFIP TLTIIISYIF IIASILHIRS IEGKYKAFST CSSHISAVAI FYGSAAFMYL 180
  181 QPSSVSSMDQ GKVSSVFYTT VVPMLNPLIY SLRNKDVTLA LKKIFERIKI M

Type	Start	End	Confidence
Cytoplasmic	1	17	0.75
Transmembrane Helix	18	40	0.81
Non-Cytoplasmic	41	59	0.81
Transmembrane Helix	60	83	0.88
Cytoplasmic	84	92	0.76
Transmembrane Helix	93	114	0.73
Non-Cytoplasmic	115	126	0.62
Transmembrane Helix	127	148	0.87
Cytoplasmic	149	159	0.80
Transmembrane Helix	160	180	0.90
Non-Cytoplasmic	181	194	0.87
Transmembrane Helix	195	212	0.61
Cytoplasmic	213	231	0.61