YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109512256, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERQHKKTYA IKSNYWGAAR RLRERWLQRG IEGLGSVPPH PPSVALFSCD TIFPLSGCWR  60
   61 TELLLLLLLA VAVRESWQIE EKSCDLVGEK DKESKNEVAL LERLRPLFNK SFESTVGQGS 120
  121 DTYSYIFRVC REAGNHSSGA GLFQINKSNE KETVVGRINE THIFNGSNWI MLIYKGGDEY 180
  181 DNHCGKEQRR AVVMIFCNRH TLAGNFNPVS EERGKIQDCF YLFEMDSSLA CSPEVSHLSV 240
  241 GSILLVIFAS LVAVYIIGGF LYQRLVVGAK GMEQFPHLAF WQDLGNLVAD GCDFVCRSKP 300
  301 CSVPAAYRGV GNDQLGEESE ERDDHLLPM

Type	Start	End	Confidence
Non-Cytoplasmic	1	239	0.83
Transmembrane Helix	240	262	0.88
Cytoplasmic	263	329	0.81