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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109506515
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSGCWAAAV VVGSGQPGGS GVDKGSLAGA NQDMEPSGGG LGPGRGTRDK KKGRSPDELP  60
   61 ATGGDGGKHK KFTLKRLMAD ELERFTSMRI KKEKEKPNSA HRNSSASYGD DPTAQSLQDI 120
  121 SDDQVLVLFE QMLVDMNLNE EKQQPLREKD IVIKREMVSQ YLHTSKAGMN QKESSRSAMM 180
  181 YIQELRSGLR DMHLLSCLES LRVSLNNNPV SWVQTFGAEG LASLLDILKR LHDEKEETSG 240
  241 NYDSRNQHEI IRCLKAFMNN KFGIKTMLET EEGILLLVRA MDPAVPNMMI DAAKLLSALC 300
  301 ILPQPEDMNE RVLEAMTERA EMEEVERFQP LLDGLKSGTS IALKVGCLQL INALITPAEE 360
  361 LDFRVHIRSE LMRLGLHQVL QELREIDNDD MRVQLNVFDE QGDEDFFDLK GRLDDIRMEM 420
  421 DDFGEVFQII LNTVKDSKAE PHFLSILQHL LLVRNDYEAR PQYYKLIEEC VSQIVLHKNG 480
  481 TDPDFKCRHL QIDIEGLVDQ MIDKTKVEKS EAKATELEKK LDSELTARHE LQVEMKKMEN 540
  541 DFEQKLQDLQ GEKDALDSEK QQITTQKQDL EAEVSKLTGE VAKLSKELED AKKEMASLSA 600
  601 VAVAPSVSSS AAVPQAPPLP GDSGTVNSTS PTPPPLPGGA VPPPPPPPLP AGTGIPPPPP 660
  661 LPGGACISSS PQLFGSTAIP PPPPLPGATA IPPPPPLPGA TAIPPPPPLP GXTAIPPPPP 720
  721 LPGATGVPPP PPPLPGSVGV PPPPPLPGGP GLPPPPPPFP GAPGIPPPPP GMGVPPPPPF 780
  781 GFGIPAAPVL PFGLTPKKVY KPEVQLRRPN WSKFVAEDLS QDCFWTKVKE DRFENNELFA 840
  841 KLTLAFSAQT KTSKAKKDQE GGEEKKSVQK KKVKELKVLD SKTAQNLSIF LGSFRMPYQE 900
  901 IKNVILEVNE AVLTESMIQN LIKQMPEPEQ LKMLSELKEE YDDLAESEQF GVVMGTVPRL 960
  961 RPRLNAILFK LQFSEQVENI KPEIVSVTAA CEELRKSENF SSLLELTLLV GNYMNAGSRN1020
 1021 AGAFGFNISF LCKLRDTKSA DQKMTLLHFL AELCETDHPD VLKFPDELAH VEKASRVSAE1080
 1081 NLQKNLDQMK KQIADVERDV QNFPAATDEK DKFVEKMTSF VKDAQEQYNK LRMMHSNMET1140
 1141 LYKELGDYFV FDPKKLSVEE FFMDLHNFRN MFLQAVKENQ KRRETEEKMR RAKLAKEKAE1200
 1201 KERLEKQQKR EQLIDMNAEG DETGVMDSLL EALQSGAAFR RKRGPRQVNR KAGCAVTSLL1260
 1261 ASELTKDDAV AASSAKVPKK SEGVTTILEE AKELVGRAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle