YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109506333
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGLTGPAG AAAPVVSSAS GTVTMAPVAA LPVRVESTPV ALCPVTKAPV NVCVDSVAPQ  60
   61 SLPAPVGTLV TKVVPVTALP KLGGPRLPAP QIVTVKTPST TTIQLPANLQ LPPGTVLIKS 120
  121 NSGQLMLVSP QQAVAGTKTT STITPRPAVP ANTQTVKICT VPNSSSQLMK KVTVAPVKSL 180
  181 TQIGTTVATT ASSASSGQRF FAAETKLMEL ISESYPVAF

Type	Start	End	Confidence
Signal Peptide	1	21	0.90
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	219	0.98