YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109510290
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADDSFGPGP ASPATSASVA TISTTSTSAT ATATTTTTTT AGGGSSHFIS TETRHKNMAE  60
   61 MEKEGRPPEN KRSRKPAHPV KREINEEMKN FAENTMNELL GWYGYDKVEL KDGEDIEFRS 120
  121 YTTDGESRQH ISVLKENSLP KPKLPEDSVI SSYNISTGYS GLATGNGLSD SPAGSKDHGN 180
  181 VPIIVPLIPP PFIKPPAEDE VSNVQIMCAW CQKVGIKRYS LSMGSEVKSF CSEKCFAACR 240
  241 RAYFKRNKAR DEDGHAESFP QQHYAKETPR LAFKNNCELL VCDWCKHIRH TKEYLDFGDG 300
  301 ERRLQFCSAK CLNQYKMDIF YKETQANLPA GLCGTLHPHM ESKAEGTGVQ LLTPDSWNIP 360
  361 LTDARRKAPS PVAAAGQSQG PGPSSSTTVS PSDTANCSVT KIPTPVPKSL PISETPSIPP 420
  421 VSVQPPASIG PPLGVPPRSP PMVMTNRGPV PLPIFMEQQI IQQIRPPFIR GPPHHASNPN 480
  481 SPLSNPMLPG IGPPPGGPRN LGPTSSPMHR PMLSPHIHPP STPTMPGNPP GLLPPPPPGA 540
  541 PLPSLPFPPV SMMPNGPMPV PQMMNFGLPS LAPLVPPPTL LVPYPVIVPL PVPIPIPDGV 600
  601 IDLTVGHRAR LHNVIHRALH AHVKAEREPG AAERRTCGGC RDGHCSPAPA EAKGAEPPPE 660
  661 QPPPPAPPKK LLSPEEPAVN ELESVKENNC ASNCHLDGEV TKKLMGEEAL AGGDKSDPNL 720
  721 NNPADEDHAY ALRMLPKTGC VIQPVPKPAE KAAMTPCVIS SPMLSAGPED LEPPLKRRCL 780
  781 RIRNQNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle