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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|197246831, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTHTRGAPT VFFICLLCCV SAYITDENPE VMIPFTNANY DSHPMLYFSR KDVAELQLRA  60
   61 ASSHEHIAAR LTEAVHTMLT NPLEYLPPWD HKEYSARWNE IYGNNLGALA MFCVLYPENI 120
  121 EAREMAKDYM ERMAAQPSWL VKDAPWDEVP LAHSLVGFAT AYDFLYNYLS KTQQETFLEV 180
  181 IANASGYMYE TSYRRGWGFQ YLHNHQPTNC MALLTGSLVL MNQGYLQEAY LWTKQVLSIM 240
  241 EKSLVLLREV TDGSLYEGVA YGSYTTRSLF QYMFLVQRHF DINHFGHPWL KHHFAFMYRT 300
  301 VLPGFQRTVA IADSNYNWFY GPESQLVFLD KFVMRNGSGN WLADQIRKNR VVEGPGTPSK 360
  361 GQRWCTLHTE FLWYDASLKS VPPLDFGTPT LHYFEDWGVV TYGSALPAEI NRSFLSFKSG 420
  421 KLGGRAIYDI VHRNKYKEWI KGWRNFNAGH EHPDQNSFTF APNGVPFITE ALYGPKYTFF 480
  481 NNVLMFSPAV SKSCFSPWEG QVTEDCSSKW SKYKHDLAAS CQGRVIAAEE KDGVVFIRGE 540
  541 GVGAYNPMLN LKNIHRNLIL LHPQLLLLVD QIHLGEESPL ETAASFFHNV DVPFEETVVD 600
  601 GVHGAFIRQR DGLYKMYWMD DTGYSEKATF ASVTYPRGYP YNGTNYVNVT MHLRSPITRA 660
  661 AYLFIGPSVD VQSFSIHGDP QRLDVFVATS EHAYATYLWT GENTGQSAFA QVIADHQKIL 720
  721 FDQSSAIKST TVPEVKDYAA IVERNLQHFK PVFQLLEKQI LSRVQNTASF RKTAERLLRF 780
  781 SDKRQTEEAI DRIFAISQQQ RQQRGKSKKS RRTGKHYKFV DAVPDIFAQI EVNEKKIRQK 840
  841 AQILAQKEQP IDEDEEMKDL LDFADVTYEK HRNGGSMKDG FGQARMVTSH NRAPSLSASY 900
  901 TRLFLILNIA IFFVMLAMQL TYFQRAQSLH GQRCLYAVLL IDSCVLLWLY SSCSQSQC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle