YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109509912, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTCCTRTC VIAASTTSVC SSNLSCGSRI CSPSICTGAS WQADNCQESY CEPPCCAPSC  60
   61 CAPTPCLLCT PVNCVSSPCC QSSCCTPSCC QQSSCQPACC TCSPCQQPCG VTLCCKPVCC 120
  121 VPVCCGASSS CCQQSSCEPS CCTSSPCQQP CGPSCCVPVC CRPVCCTPIC SASSSSCCQP 180
  181 SCCAPVCCKP VCCKPCSSLS LLCSPVCRPA CCVPTSSCCA SSCQPNCCRP ASCVSLLCRP 240
  241 ACSRQACSGH KSTC

Type	Start	End	Confidence
Signal Peptide	1	21	0.63
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	254	0.99