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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109509778
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGETQLYA KVSNKLKGRS TSSLLDPLLA LGFPTHTALK ALAATGMKTA EEAADWLHGH  60
   61 CSDPSLDDPI PQEYALFLCP TGPLLEKLQE FWRESRRQCA KNKAHEVFPH VTLCDFFTCE 120
  121 DQKVECLYEA LRRAGDRILG SFPALVPLVL HSSISYLGFF INDSPADVIR DFAMAFATEA 180
  181 SALAGSCRGI YQLVECLPGH KPGLFQAVLT YMERLPFPTT KKYCTIKPCT KQLHLTLAHK 240
  241 FYPHHQRTLE QLARAIQPSH TCQWTAALYS RDMRFVHYQT LKALFQYKPQ NADELMLSPG 300
  301 DYIFVDPTQQ EEASEGWAIG ISHRTGCRGF LPENYTERAN EADTWVKHRT YTFSLAMDLN 360
  361 SRKEFEASSR RNGDSHTPSV SRSISDIQAL QATIARRGVL VIRHGERVDQ VFGKSWLHQC 420
  421 TTTDGKYYRP DLNFPRSLPR RSNGIKDFEN DPPLSSCGIF QARLAGEALL DSGVRVTAVF 480
  481 ASPALRCVQT AKHILEELKL ERRLKIKVEP GIFEWMKWEA GKATLTFLTL EELKEADFNV 540
  541 DLDYRPAFPC CSLLPAESYD QYVERCAVSM GQIINTCPQD MGITLIVSHS SALDSCTRPL 600
  601 LGLPPRECGD FAQLVRKIPS LGMCFCEENK EDGKWDLVNP PVKTLTHGAN SVFNWRNWIS 660
  661 SN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle