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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109509776, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGETQLYA KVSNKLKGRS TSSLLDPLLA LGFPTHTALK ALAATGMKTA EEAADWLHGH  60
   61 CSDPSLDDPI PQEYALFLCP TGPLLEKLQE FWRESRRQCA KNKAHEVFPH VTLCDFFTCE 120
  121 DQKVECLYEA LRRAGDRILG SFPALVPLVL HSSISYLGFF INDSPADVIR DFAMAFATEA 180
  181 SALADCTIKP CTKQLHLTLA HKFYPHHQRT LEQLARAIQP SHTCQWTAAL YSRDMRFVHY 240
  241 QTLKALFQYK PQNADELMLS PGDYIFVDPT QQEEASEGWA IGISHRTGCR GFLPENYTER 300
  301 ANEADTWVKH RTYTFSLAMD LNSRKEFEAS SRRNGDSHTP SVSRSISDIQ ALQATIARRG 360
  361 VLVIRHGERV DQVFGKSWLH QCTTTDGKYY RPDLNFPRSL PRRSNGIKDF ENDPPLSSCG 420
  421 IFQARLAGEA LLDSGVRVTA VFASPALRCV QTAKHILEEL KLERRLKIKV EPGIFEWMKW 480
  481 EAGKATLTFL TLEELKEADF NVDLDYRPAF PCCSLLPAES YDQYVERCAV SMGQIINTCP 540
  541 QDMGITLIVS HSSALDSCTR PLLGLPPREC GDFAQLVRKI PSLGMCFCEE NKEDGKWDLV 600
  601 NPPVKTLTHG ANSVFNWRNW ISSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle