YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109505623
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRGLRTSRG SGECAPRTEG VCFRVTGQIA FFPLAMVQLR PRSSRIPAPA EAMVDEDQAA  60
   61 SEEEEEAEHG LLLAQPSSGA AAEPLDEEED GDDEAPEELT FASAQAEARE EELRVRESAR 120
  121 RDKTLLKEKR KRREELFIEQ KKRKLLPDAV LEQLTTASEA DIKKSPGNVK VNLKKEHEQP 180
  181 AAKGRNSKKV KIQKVQSVGQ TKSYLAVRLK DEDLRDSRQE AAKHFIHSCL YGSGSRRTTV 240
  241 NKFLSLNNKR LPVKKAAAQF LNSTWGTQKQ QNAKRFKKRW MAKKMKKKTS K

Type	Start	End	Confidence
Cytoplasmic	1	19	0.73
Transmembrane Helix	20	37	0.72
Non-Cytoplasmic	38	291	0.99