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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109509528
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWNTAWCSV LALWLLWGAV CSNAASGDGN AFPFDIEGSA VVGRQDPSET SDSRVTMGRL  60
   61 PPAAERCDAG FFRTSSGECS PCDCNGNSHE CLDGSGFCLH CQRNTTGEHC ERCLAGYIGD 120
  121 SIRGAPRFCQ PCPCPLPHLA NFAESCFRKN GAVRCMCKEN YAGPNCERCA PGYYGNPLLI 180
  181 GSTCKKCDCS GNSDPNLIFE DCDEITGQCR NCLRNTTGFK CERCAPGYYG DARIAKNCAV 240
  241 CNCGGGPCDS VTGECLEEGF ELPTGCDKCV WDLTDDLRLA ALSIEESKSG LLSVSSGAAA 300
  301 HRHVTDMNST IHLLKTKISE SEIQFCLEVI FLTSSENTLR SLLSDVEELD EKGSRASRKG 360
  361 TLVEKESTDT IDQATQLVEQ AHSMRDKIQE INSKMLYYGE NQELGPEEIA EKLVLAQKML 420
  421 DEIRSRQPFL THRELVDEEA DEVQELLSQA ENWQRLHNDT RSLLPVVLEQ LDDYNAKLSD 480
  481 LQESINQALD HVRDAEDMNR AITSKQRDHE KQHERVKEQM EAVGTSLSLS ADSLITPRLT 540
  541 LEELDEIIKN ASGIYAEIDG AKNELQGKLS NLSNLSHDLV QEAVDHAYNL QQEANELSRN 600
  601 LHSSDMNGLV QKALDASNVY ENIANYVSEA NETAELALNI TDRIYDAVSG IDTQIVYHKD 660
  661 ESDNLLNQAR ELQAKADSSS DEAVADTSRR VGGALWRKGA LRDKLTEAVK QLQAAERGDA 720
  721 HQRLGQTKLI IEEANKTTMA VQQVTTPMAN NLSNWSQNLQ TFDSSAYNTA VNSARDAVRN 780
  781 LTEVVPRLLG QLRTVEQKRP ASNVSASIQR VRELIAQTRS VASKIQVSML FDGHSAVEVH 840
  841 PKVSVDDLKA FTSISLYMKP PPKPAEPTGA WVEDQFVLYL GSKTAKKEYM GLAIKNDNLV 900
  901 YVYNLGTKDV EILLDSKPVS SWPAYFSIVK IERVGKHGKV FLTVPSLSST AEEKFIKKGE 960
  961 FAGDDSLLDL TPEDTVFYVG GVPANFKLPA SLNLPSYSGC LELATLNNDV ISLYNFKHIY1020
 1021 NMDPAKSVPC ARDKLAFTQS RAASYFFDGS SYAVVRDITR RGKFGQVTRF DIEIRTPADN1080
 1081 GLVLLMVNGS MFFSLEMRNG YLHVFYDFGF SNGPVHLEDT LKKAQINDAK YHEISIIYHN1140
 1141 DKKMILVVDR RHVKSTDNEK KKIPFTDIYI GGAPQEVLQS RTLRAHLPLD INFRGCMKGF1200
 1201 QFQKKDFNLL EQKETLGVGY GCPEDSLISR RAYFNGQSFI ASTQKISFFD GFEGGFNFRT1260
 1261 LQPNGLLFYY ASGSDDVFSI SLDNGTVVMD VKGIKVKSAD KQYHDGLSHF VVTTVSATRY1320
 1321 ELVVDKSRLG SKNPTKGKAE PTQTTEKKFY FGGSPISPQY ANFTGCISNA YFTRLDRDVE1380
 1381 VEDFQRYSEK VHTSLYECPI ESSPLFLLHK KGKNSSKPKT NKQGEKSKDA PSWDPIGLKF1440
 1441 LERKASRDSH CHLSSSPRAI EHAYQYGGTA NSRQEFEHIQ GDFGEKSQFA IRLKTRSSHG1500
 1501 MIFYVSDQEE NDFMTLFLAH GRLVFMFNVG HKKLKIRSQE KYSDGLWHDV IFIREKSSGR1560
 1561 LVIDGLRVLE ERLPPSDAAW KIKGPIYLGG VAPGRAVKNV QINSVYSFSG CLGNLQLNGA1620
 1621 SIASASQTFS VTPCFEGPME TGTYFSTEGG YVVLDESFNI GLKFEIAFEV RPRSSSGTLV1680
 1681 HGHSVNGEYL NVHMKSGQVI VKVNNGVRDF STSVTPKQNL CDGRWHRITV IRDSNVVQLD1740
 1741 VDSEVNHVVG PLNPKPVDHR EPVFVGGVPE SLLTPRLTPS KPFTGCIRHF VIDGRPVSFS1800
 1801 KAALVSGAVS INSCPTA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle