YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109509460
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLRALLHC LLPWYCALCA AAGSQTPDPR LSGKLHDYVV TVPCSTDFQG RFLSHVVSAP  60
   61 AAASSRSHLR VARSPLSLER ETPRPRHHFL YFNVTVFGKL LHLRLQPNRR LVAPGAPVEW 120
  121 QEDFRELFRQ PLQRECVYTG GVTGMPGAAV AISNCDGLAG LIRTDNSDFF IEPLERGQQE 180
  181 KEAGGRTHVV YRREAVQREW TEPHGDLHNE AFGLGDLPNV LDLVGDQLGD TERKRRHAKP 240
  241 GSYSIEVLLA VDDSVVRFHG REHTQNYVLT LMNIVDEIYH DESLGAHVNI ALVRLIMVGY 300
  301 RQSLSLIERG NPARSLEQVC RWAHSQQRQD PSHTEHHDHV IFLTRQNFGP SGYAPVTGMC 360
  361 HPLRSCALNH EDGFSSAFVV AHETGHVLGM EHDGQGNGCD DETSLGSVMA PLVQAAFHRF 420
  421 HWSRCSKLEL SRYLPSYNCL LDDPFERTWP QPPELPGIDY SMDEQCRFDF GTGYHTCLAF 480
  481 RTFEPCKQLW CSHPDNPYFC KTKKGPPLDG TECAPGKWCF KGHCVWKSPE QTYGQDGGWS 540
  541 SWTNFGSCSR SCGGGVRSRS RSCDNPPPAY GGRLCSGPMF EYQICNSEDC PGPFEDFRAQ 600
  601 QCAKRNSYYT HQDAKHSWLP YEPDSEAQKC ELICQSADTG DVVFMNQVVH DGTRCSYRDP 660
  661 YSVCARGECV PFGCDKEVGS MKTDDKCGVC GGDNSHCRTV KGTLGKASKQ AAALKQVQIP 720
  721 AGARHIQIEL LEKAPRRIAV KNQVTGSFIL NPKGKEASSR TFTALGLEWE HAAEDTKDSL 780
  781 KTNGPLPEAI AVLVLPPAEG KPRGSLAYKY VIHEDLLPLI GSNNVLLEEM DSYEWALKSW 840
  841 SPCSKACGGG IQFTKYGCRH RRDHHMVQRH LCDHKKRPKA IRRRCNQHPC PQPTWVTEEW 900
  901 GACSRSCGKL GLQTRGVQCL LPLSNGTHKA MPAKACLGNR PEAKRPCLRV PCPAQWRTGA 960
  961 WSQCSATCGK GIQQRQVVCR NSSSALGPCE GVKPDTVRIC SQPACGGDLQ NSTVNAEVQD1020
 1021 PVTKMGPWEP QSRPLTPMNR ISTMEPCVGD RSVFCRMEVL DRYCTIPGYL RLCCESCIKK1080
 1081 ASSSNASLAS LPTFSTPGSL LPEPTATQED MESTRGPTRL EDHRQSQPTQ LSGAVDRISS1140
 1141 VTQHLVTPQM LSPKASESNS PATPQGPPWG RTQTAVPTSE GQGQSREEPG HSGTSLPTTS1200
 1201 PVT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle