YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109509009, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVTATVMC LLLLAWLPTG ITHQDPPFWG KPRSHKTTLR CYSAEELSHG QAPPHLLTRS  60
   61 ARWEQALPVA LVASLEATGR RRQQEGPLPG TQCPVLRPEE VLEADTHERS ISPWRYRIDT 120
  121 DENRYPQKLA VAECLCRGCI NAKTGRETAA LNSVQLLQSL LVLRRRPCSQ DGAADPTPGS 180
  181 FTFHTEFIRV PVGCTCVLPR STQ

Type	Start	End	Confidence
Signal Peptide	1	24	0.97
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	203	0.99