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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109508364
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSDRSALGR PGCAGSCLSS RASLLLLLLV LLDCLGGGTA SEDAEVYAAE NWLRLYGYLP  60
   61 QPSRHMSTMR SAQILASALA EMQSFYGIPV TGVLDEETKT WMKRPRCGVP DQFGVRVKAN 120
  121 LRRRRRRYTL TGKTWSNYHL TFSIQNYTEK LGWYNSMEAV RRAFQVWEQV TPLVFQEVPY 180
  181 DDIRLRRRAE ADIMVLFASG FHGDSSPFDG VGGFLAHAYF PGPGLGGDTH FDADEPWTFS 240
  241 STDLHGISLF LVAVHELGHA LGLEHSSNPS AIMAPFYQWM DTDNFQLPED DLRGIQQLYG 300
  301 GKPERPPKPG PPPQPRATER PDQYGPNICD GNFDTVAVLR GEMFVFKGRW FWRVRHNRVL 360
  361 DNYPMPIGHF WRGLPGNISA AYERQDGHFV FFKGNRYWLF REANLEPGYP QPLSSYGTDI 420
  421 PYDRIDTAIW WEPTGHTFFF QADRYWRFNE ETQHGDPGYP KPISVWQGIP NSPKGAFLSN 480
  481 DAAYTYFYKG TKYWKFNNER LRMEPGHPKS ILRDFMGCQE HVEPRSRWPD VARPPFNPNG 540
  541 GAEPETEDDS KEEDVGDKDE GSRVVVQMEE VVRTVNVVMV LVPLLLLLCI LGLAFALVQM 600
  601 QRKGAPRMLL YCKRSLQEWV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle