YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109508347
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQGVAWIRN EVEASHLIMV RYFPKDRIHG GSESGQVLWH LESKLELDGF EGEASSTSMI  60
   61 SGASSPYQPT TEPVSQRRGL AGLRCDPDYL RGALGRLKVA QVILALIAFI CIETIMECSP 120
  121 CEGLYFFEFV SCSAFVVTGV LLILFSLNLH MRIPQINWSL TDLVNTGLST FFFFIASIVL 180
  181 AALNHKTGAE IAAVIFGFLA TAAYAVSTFL AVQKWRVSIR QQSANDYIRA RTESRDVDGR 240
  241 PEIQRLDT

Type	Start	End	Confidence
Cytoplasmic	1	98	0.97
Transmembrane Helix	99	116	0.95
Non-Cytoplasmic	117	124	0.77
Transmembrane Helix	125	147	0.91
Cytoplasmic	148	162	0.79
Transmembrane Helix	163	183	0.94
Non-Cytoplasmic	184	190	0.82
Transmembrane Helix	191	212	0.95
Cytoplasmic	213	248	0.98