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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109508075
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVQAAAA PSGVLGTCGL EQILEALKLL LSPGGSGSTS LQNTKHDVLL ETLKSNLSAL  60
   61 EAKFLKDAQW KKLKTLRDEI ADKAEWPQSS EDITWSFTSQ TLLLLLCLKE IMTRLVAEFN 120
  121 PGKPNPRTPE AAPALSPDTL SVSQQKTFQS VLQFVVTLGV CPYLMPGVGV PLRDRTEFGA 180
  181 VVQGIVRLEA APHATRRLYI CCRVLLDLAQ HASLGSLIFC RHFGDIAAGL CQLGFCPTKR 240
  241 KPPVPVEEVL TEEERTLSRQ ALRDILDQVY QPLAVRELLI LQGGSPQSCT DVKTKLRCPA 300
  301 PAWLRRLCGQ LLSERLMRPN GVQAVVRGIL EGAGAGAAGG SDAEATAADW KKCDLIAKIL 360
  361 ASCPQQSLSP ESYYKDICPQ ILDLFHLQDK LTARQFQRVA TTTFTTMLRE RPELAPKYLL 420
  421 QPMLAPLHRC STTAEIPESD MVPGTVLVTE EELSRCVEDV FKVVDFVAAT LQRACAGLAH 480
  481 EAESTVGSQT LSMAMGLVAA MLGGAVQLKS SDFVVLKQLL PLLEKVSNTY PDPVIQELAV 540
  541 DLRITISTHG AFSTEAVSTA AQSTLNKKDP EQKIKEQRQT SYDASTEGTQ NRPEQEQNPL 600
  601 RTGQGSSEPC TATSQPPGNI TTEQFREVLL SACDPQVPTR AAALRTLSRW VEQREGRALE 660
  661 EQKKLLQIFL ENLEHEDSFV YLSAIQGVAL LSDVYPEEIL VDLLARYDSS KDKHTPETRM 720
  721 KVGEVLMRIV RALGEFCLLL HSIPLKQGRG QLPQNLSCLQ EGKEHLAFAA NSARGAHSIG 780
  781 SRLPRLHRTC VLYMTLPLSA AVWKGKENEI GKKVISPEPQ EQSRPQRDMV SKYREPLIHT 840
  841 FLRGVKDPDG AHRASSLSNL GELCQRLDFL LGPVVHEVTI CLTAVAKTDT DVQVRRAAVH 900
  901 VVVLLLRGLS QKATEVLSDV LKDLYHLLKH VVRLEPDDVA KIQAQLALEE LDEIMRNFLF 960
  961 PPQKLEKKIM VLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle