YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157824222, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARSLWAVQ RLQRLLASGA VSESRGWLHP FSTATQRTAG EDCSSEDPPD GLGPSLAEQA  60
   61 LRLKAVKLEK EVQDLTLRYQ RAVADCENIR RRTQRCVEDA KIFGIQSFCK DLVEVADILE 120
  121 KTAECFSDGA EPQDHKLTLE KVFQGLSLLE AKLKSVFTKH GLEKMAPIGD KYDPHEHELI 180
  181 CHMPAGVGVQ PGTVALVRQD GYKLHGRTIR LAQVEVAVES QRRL

Type	Start	End	Confidence
Signal Peptide	1	26	0.64
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	224	0.99