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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109506306
Protein type: Transmembrane
Type Confidence: 0.65
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 XRGGGTDAAA TGGVQPPPPP ATAPPEPLRK PRMDPRRRQA ALSFLTNISL DGRPPLQDHE  60
   61 WGGGEEGGAA KPGARARFSL LAAGCNAFSA PGTAAAPWIA GSGSSPCPLP PSLVPRVLGE 120
  121 PSQPPRSAPA VTGAQLQLPD GPGGAGQEEL EEDDAFTNVQ VPPASFLGSG TPGSASGSRG 180
  181 RLNSFTQGIL PIAFSRQNSQ NYCALEQSGQ GGSTTALEQL QRSRRRLISQ RSSLETLEDI 240
  241 EENAPLRRCR TLSGSPRPKN FKKIHFIKNM RQHDTRNGRD LKLDGGRQSA GAMSLKEIIG 300
  301 LEGVELGADG KTVSYTQFLS PTNAFGTRRN TIDSTSSFSQ FRSLSHRSLS MGRTGSTQGS 360
  361 LDAGNDLGDF IDYDPNLLDD PQWPCGKHKR VLTFPSYMTT VIDYVKPSDL KKDMNETFKE 420
  421 KFPHIKLTLS KIRSLKREMR KLAQEDCGFE EPTVAMAFVY FEKLALRGKL NKQNRKLCAG 480
  481 ACVLLAAKVG SDLKKHEVKH LIDKLEEKFR LNRRELIAFE FPVLVALEFA LHLPEHEVMP 540
  541 HYRRLIQSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle