YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109506264
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPGFLRAVA GQGAAAAVQL LVTLGFLSSL VKTQVTGVLD DCLCDIDSID NFNTYKIFPK  60
   61 IKKLQERDYF RYYKVNLKRP CPFWAEDGHC SIKDCHVEPC PESKIPVGIK AGRSNKYSQA 120
  121 ANNTKELDDC EQANKLGAIN STLSNESKEA FIDWARYDDS QDHFCELDDE RSPAAQYVDL 180
  181 LLNPERYTGY KGSSAWRVWN SIYEENCFKP RSVYRPLNPL APSRGEDNGE SFYTWLEGLC 240
  241 LEKRVFYKLI SGLHASINLH LCANYLLEET WGKPSWGPNI KEFKRRFDTV ETKGEGPRRL 300
  301 KNLYFLYLIE LRALSKVAPY FERSIVDLYT GNLEDDADTK TLLLSIFQDT KSFPMHFDEK 360
  361 SMFAGDKKGA KSLKEEFRLH FKNISRIMDC VGCDKCRLWG KLQTQGLGTA LKILFSEKEI 420
  421 QKLPENSPSK GFQLTRQEIV ALLNAFGRLS TSIRELQNFK ALLQHRR

Type	Start	End	Confidence
Signal Peptide	1	33	0.83
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	467	0.99