YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109505388, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKPHSLEP TWPAVEIPGF ESMTPIFLLA TLCLGMISAA PTHDPSFDTV WEEWKTKHGK  60
   61 TYNTNEEGQK RAVWENNMKM INLHNEDYLK GKHGFSLEMN AFGDLTNTEF RELMTGFQGQ 120
  121 KTKMMKVFPE PFLGDVPKTV DWRKHGYVTP VKNQGPCGSC WAFSAVGSLE GQVFRKTGKL 180
  181 VPLSEQNLVD CSWSHGNKGC DGGLPDFAFQ YVKDNGGLDT SVSYPYEALN GTCRYNPKYS 240
  241 AAKVVGFMSI PPSENALMKA VATVGPISVG IDIKHKSFQF YKGGMYYEPD CSSTNLNHAV 300
  301 LVVGYGEESD GRKYWLVKNS WGRDWGMDGY IKMAKDWNNN CGIASDASYP IV

Type	Start	End	Confidence
Signal Peptide	1	39	0.47
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	352	0.97