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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109505315
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLAYRGRCP EAPGDYSSHK PAGQASGEAG GGLCLTPGRK EWVVEELSSG WHCSPLLAPL  60
   61 PPLAPDTSAE AGGGLCLTPG RKEWVVEELS SGWHCSPLLA PLPPLRYPGG TFGTWHRILA 120
  121 RHQPSYPQPE HKQALGSPQT DPSRRASLPL SPSENAQPVH VIAAERVGGV CCTAAAAVEA 180
  181 SGSSGDSGAG LWGGCPPTAG LLRNGGCGWS TSIFRVGERV RYYRRRNLQG LLLEMLFLSF 240
  241 YAGSWESWIC CCCVIPVDRP WDRGRRWQLE MADTRSVYET RFEAAVKVIQ SLPKNGSFQP 300
  301 TNEMMLRFYS FYKQATEGPC KLSRPGFWDP IGRYKWDAWS SLGDMTKEEA MIAYVEEMKK 360
  361 IIETMPMTEK VEELLHVIGP FYEIVEDKKN SKSSDLTSDL GNVLTSSNAK AVNGKAESSD 420
  421 SGAESEEEEA QEELKGAEQS GSDDKKMMTK STDKNLEIIV TNGYKDSFAQ DSDIHTDSSR 480
  481 SARRSEDKKP TDQSSQQTGN TVLCVHQDTN EDPGEDASGV HHLTSDSDSE VYCDSMEQFG 540
  541 QEEYYLGGDP AQHLEGSGFC EDAQLSPGNG SIGKMQMRAV KGKGEVKHGG EDGRSSSGTP 600
  601 HREKRGGESE DISGVRRGRG HRMPHLSEGT KGRQVGSGGD GERWGSDRGS RGSLNEQIAL 660
  661 VLIRLQEDMQ NVLQRLHKLE TLTASQAKLS WQTSNQPSSQ RPSWWPFEMS PGALAFAIIW 720
  721 PFIAQWLVHL YYQRRRRKLN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle