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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109504531, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPEVRRVCC AVGSCVRSAC AAAWAMGRRA RGRRFQQPPQ PEGEEDGSDG SRKRGQEGWE  60
   61 GGYPEIIKEN KLFEHYYQEL KIVPEGEWDQ FMGSLREPLP ATLRITGYKS HAKEILHCLK 120
  121 NKYFKELEDL EVDGQKVEVP QPLSWYPEEL AWHTNLSRKI LRKSPLLAKF HQFLVSETES 180
  181 GNISRQEAVS MIPPLLLNVE PHHKILDMCA APGSKTTQLI EMLHADMSVP FPEGFVIAND 240
  241 VDNKRCYLLV HQAKRLSSPC IMVVNHDASS IPRLTVDVDG RKEILFYDRI LCDVPCSGDG 300
  301 TMRKNIDVWK KWTTLNSLQL HGLQLRIATR GAEQLAEGGR MVYSTCSLNP VEDEAVIAAL 360
  361 LEKSEGALEL ADVSAELPGL KWMPGVSQWK VMTRDGQWFA DWQEVPQGRH TQIRPTMFPP 420
  421 KDLDKLQAMH LERCLRILPH HQNTGGFFVA VLVKKAPMPW NKRQPKVQSK SAQARDPKAS 480
  481 NTVAATKGNP SDQSELESQM ITGAGDSEAA QTTENTESNE KKDGVCGPPP SKKMKLFGFK 540
  541 EDPFVFIPED DPLFPPIEKF YALDPSFPRM NLLTRTTEGK KRQLYMVSKE LRNVLLNNSE 600
  601 KMKVINTGIK VWCRNNSGEE FDCAFRLAQE GIYTLYPFIN SRIITVSMED VKTLLTQENP 660
  661 FFRKLSSEAY SQVKDLTKGS VVLKYEPDSA NPDTLRCPIV LCGWRGKASI RTFVPKNERL 720
  721 HYLRMMGLEV LGEKKKEGVI LTNESVASPE QPEEEDAKQT AQDPCNPDSV PGCDPGAAEP 780
  781 SR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle