YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149057986, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTREQYILAT QQNNLPRPEN AQLYPVGIYG WRKRCLYFFV LLLLVTMIVN LAMTIWILKV  60
   61 MNFTVDGMGN LRVTKKGIRL EGISEFLLPL YVKEIHSRKD SPLVLQSDRN VTVNARNHMG 120
  121 QLTGQLTVGA EAVEAQCKRF EVRASEDGRV LFSADEDEIT IGAEKLKVTG TEGAVFGHSV 180
  181 ETPHVRAEPS QDLRLESPTR SLIMEAPRGV QVSAAAGDFK ATCRKELHLQ STEGEIFLNA 240
  241 DSIRLGNLPI GSFSSSPSSS NSRQTVYELC VCPNGKLYLS PAGVDSTCQS SSSICLWS

Type	Start	End	Confidence
Cytoplasmic	1	34	0.92
Transmembrane Helix	35	58	0.91
Non-Cytoplasmic	59	298	0.92