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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|149016849, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLQALSPRM LLWLVVSGIV FSRELWVCTG LDYDYTFDGN EEDKTEPIDY KDPCKAAVFW  60
   61 GDIALDDEDL NIFQIDRTID LTQGPFGKLG HITGGFGDHG MPKKRGALYQ LIDRIRRIGS 120
  121 GLEQNNTTKG KAPPKLSEQN EKNRVPRAAT SRTERIWPGG VIPYVIGGNF TGSQRAMFKQ 180
  181 AMRHWEKHTC VTFTERSDEE SYIVFTYRPC GCCSYVGRRG NGPQAISIGK NCDKFGIVVH 240
  241 ELGHVIGFWH EHTRPDRDNH VTIIRENIQP GQEYNFLKME PGEVNSLGER YDFDSIMHYA 300
  301 RNTFSRGMFL DTILPSRDDN GIRPAIGQRT RLSKGDIAQA RKLYRCPACG ETLQESSGNL 360
  361 SSPGFPNGYP SYTHCIWRVS VTPGEKIVLN FTTMDLYKSS LCWYDYIEVR DGYWRKSPLL 420
  421 GRFCGDKVAG VLTSTDSRMW IEFRSSSNWV GKGFAAVYEA ICGGEIRKNE GQIQSPNYPD 480
  481 DYRPMKECVW KIMVSEGYHV GLTFQAFEIE RHDSCAYDHL EVRDGNSENS PLIGRFCGYD 540
  541 KPEDIRSTSN TLWMKFVSDG TVNKAGFAAN FFKEEDECAK ADRGGCEQRC LNTLGSYQCA 600
  601 CEPGYELGPD RRSCEAACGG LLTKLNGTIT TPGWPKEYPP NKNCVWQVIA PSQYRISVKF 660
  661 EFFELEGNEV CKYDYVEIWS GLSSESKLHG KFCGADVPEV ITSHFNNMRI EFKSDNTVSK 720
  721 KGFKAHFFSD KDECSKDNGG CQHECVNTMG SYTCQCRNGF VLHENKHDCK EAECEQKIHS 780
  781 PSGLITSPNW PDKYPSRKEC TWAISAIPGH RIKLAFNEFE VEQHQECAYD HLEIFDGQTE 840
  841 KSPILGRLCG SKIPDPLMAT GNEMFIRFIS DASVQRKGFQ ATHSTECGGR LKAERKPKDL 900
  901 YSHAQFGDNN YPGQLDCEWL LVSEQGSRLE LSFQTFEVEE EADCGYDYVE VFDGLNSKAV 960
  961 GLGRFCGSGP PEEIYSIGDV ALIHFHTDDT INKKGFYIRY KSIRYPETMH AEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle