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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109503233, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSPLPLLYL CIAAAHLAGA RDATPTEEHT ATVRGLQGRP PDPGQPSPAL EDWEEASEWT  60
   61 SWFNVDHPGG DGDFESLAAI RFYYGPARVC PRPLALEART TDWALPAAIG ERVHANPERG 120
  121 FWCLNREQPR GRRCSNYHVR FRCPLEAAWG AWGAWGLCSK SCGPGRRLRR RSCQSSSGDT 180
  181 CPGSPQEAQK CVRSRCPGCS SDTCGCPNHI LLGSVVTPSG RPLSGARVSL RTRPGTVATS 240
  241 DTHGTFRVPG VCAGSKANVS ARMNGFSTGT AQAHANTSNS AVVTIVLEEL GKPYLVKHPE 300
  301 SRVREAGQNV TFCCKASGTP MPKKYSWFHN GTLLDRRQQG SGPHLELQGL REEQAGEYHC 360
  361 KAWNEAGTVR SRAAHLTVLA PGQPACDPRP QEHLIKLPDD CGQPGGGPTY LDVGLCADTR 420
  421 CPGPVGSGPR CGDAGSRCCS VLRLESRDIR CSGYVLPVKV VAECGCRKCL PRRGLVRGRV 480
  481 VAADSGEPLR FARILLGLAP IGFTSYQGDF TIEVPPATER LVVTFVDSSG EFVDSIRVLP 540
  541 FDPRGAGVYH EIRVLRKAAA VLLDAEQGGE IPLGGTEEAP ALGELVFPPR TFHHPDGRPY 600
  601 SGPVEARVTF VDPRDLASAA AASSDLRYLD SSGELAPLRT YGMFAVDLHA PGSTEQLHVA 660
  661 RADVRVDADH VRMPGHADAL ALWSLDPETG LWEEEGAEQG GGGFRREKEA VRVRREERTF 720
  721 LVGALTVRER RLFNLDVPER RRCFVKVRAY GTDRFAPSEQ VQGVVVTLLN LEPAPGFTAN 780
  781 PRAWGRFDSA VTGPNGACVP AFCDAERPDA YTAFVTASLG GEELEAAPSR PRATAATVGV 840
  841 AEPYLERLGY QRTDHDDPAL KRTGFRLNLA RPRTGHESEA HGPVYPWRRL RDCEDAPVTD 900
  901 SHFRFSRVEA DKYEYDVVPF HEGAPASWTG DLLAWWPNPQ EFRACFLKVR LQGPQEYMVR 960
  961 SHNAGGTHED TRGHLYGLRD TRSVRNPERP GASAACVEFK CGGMLFDQRQ VDRTLVTVTP1020
 1021 QGSCRRVAVN TLLQDYLARH PPLAPADDPA TFAMLAPLDA LGHNYGVYTV TDQSPRLAKE1080
 1081 IAIGRCFDGS SDGFSREMKA DAGTAVTFQC REPPARPSLF QRLLENPASA LGDIRREMGQ1140
 1141 AARDSRVTQT QAGDTGPFGS GQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle