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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157821945, gi...
Protein type: Transmembrane
Type Confidence: 0.66
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLDAGPQFP AIGVGSFARH HHHSAAAAAA AAAEMQDREL SLAAAQNGFV DSAAAHMGAF  60
   61 KLNPGAHELS PGQSSAFTSQ GPGAYPGSAA AAAAAAALGP HAAHVGSYSG PPFNSTRDFL 120
  121 FRSRGFGDSA PGGGQHGLFG PGAGGLHHAH SDAQGHLLFP GLPEQHGPHA SQNVLNGQMR 180
  181 LGLPGEVFGR SEQYRQVASP RTDPYSAAQL HNQYGPMNMN MGMNMAAAAA HHHHHHHHPG 240
  241 AFFRYMRQQC IKQELICKWI DPEQLSNPKK SCNKTFSTMH ELVTHVSVEH VGGPEQSNHV 300
  301 CFWEECPREG KPFKAKYKLV NHIRVHTGEK PFPCPFPGCG KVFARSENLK IHKRTHTGEK 360
  361 PFQCEFEGCD RRFANSSDRK KHMHVHTSDK PYLCKMCDKS YTHPSSLRKH MKVHESSPQG 420
  421 SESSPAASSG YESSTPPGLV SPSAEPQSSS NLSPAAAAAA AAAAAAAAAV SAVHRGAGSG 480
  481 SSGSGGXXXX XXXLAGAAGQ PEAIAASPPT SMNGTCEGPG LSPIPCSLIH RRPPKNPPRA 540
  541 P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle