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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109502672, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIPFGSCLY SCLALLVLLP SLSLAQYESW PYQLQYPEYF QQPPPEHHQH QVPSDVVKIQ  60
   61 VRLAGQKRKH NEGRVEVYYE GQWGTVCDDD FSIHAAHVVC REVGYVEAKS WTASSSYGPG 120
  121 EGPIWLDNIY CTGKESTLAA CSSNGWGVTD CKHTEDVGVV CSEKRIPGFK FDNSLINQIE 180
  181 SLNIQVEDIR IRPILSAFRH RKPVTEGYVE VKEGKAWKQI CDKHWTAKNS HVVCGMFGFP 240
  241 AEKTYNPKAY KTFASRRKLR YWKFSMNCTG TEAHISSCKL GPPMFRDPVK NATCENGQPA 300
  301 VVSCVPSQIF SPDGPSRFRK AYKPEQPLVR LRGGAQVGEG RVEVLKNGEW GTVCDDKWDL 360
  361 VSASVVCREL GFGTAKEAVT GSRLGQGIGP IHLNEVQCTG TEKSIIDCKL NTESQGCNHE 420
  421 EDAGVRCNIP IMGFQKKVRL NGGRNPYEGR VEVLTERNGS LVWGNVCGQN WGIVEAMVVC 480
  481 RQLGLGFASN AFQETWYWHG NIFANKVIMS GVKCSGTELS LAHCRHDEEV VCPEGGVQYG 540
  541 AGVACSETAP DLVLNAEIVQ QTAYLEDRPM ALLQCAMEEN CLSASAVHTD PTRGHRRLLR 600
  601 FSSQIHNNGQ SDFRPKNGRH AWIWHDCHRH YHSMEVFTYY DLLSLNGTKV AEGHKASFCL 660
  661 EDTECEGDIQ KSYECANFGE QGITMGCWDM YRHDIDCQWI DITDVPPGDY LFQVVINPNY 720
  721 EVPESDFSNN IMKCRSRYDG YRIWMYNCHV GGAFSEETEQ KFEHFSGLLN NQLSVQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle