YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109502175
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPALLATVAL LGRTSPGHPG FHRAQSSPNP ARLPRLRPAP GPQATPGSLG ALGPRPPGAA  60
   61 GEGRGAGRRG GVARSVCGRG SHCLVNSCCC CTSASLPARA RHEWPGHPPR DRGPRVSSAG 120
  121 AAVGPEPLQG GGGGPARALL TAEFPLCSAC MGPFAGWGGG FAMSDDDSRA STSSSSSSSS 180
  181 NQQTEKEGST PKKKESKVSM SKNSKLLSTS AKRIQKELAD ITLDPPPNCS AGPKGDNIYE 240
  241 WRSTILGPPG SVYEGGVFFL DITFTPEYPF KPPKVTFRTR IYHCNINSQG VICLDILKDN 300
  301 WSPALTISKV LLSICSLLTD CNPADPLVGS IATQYMTNRA EHDRMARQWT KRYAT

Type	Start	End	Confidence
Signal Peptide	1	17	0.96
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	355	0.99