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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109500406
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFLSLWLIA ASLVEVRTSA DGQAGAEEMV QIDLPTKRYR EYELVTPVST NLKGHYLSHI  60
   61 LSANHKKRSP RDVSSNSEQL FFNVTAFGRD FHLRLRPNTH FIAPGAVVEW HETAPRPGNT 120
  121 TDPRNSRPHR SSSEGGWRSE PLQTSCAYVG DIMDVPGTSV AISNCDGLAG MIKSDNEEYF 180
  181 IEPLERGKQM DEENGRIHIV YKRSAMERAP RDVSEDVYYK ESNLEGLDDL GTVYSNIGQQ 240
  241 LNETTRRRRH AGENDYNIEV LLGVDDSVVR FHGKEHVQNY LLTLMNIVNE IYHDESLGVH 300
  301 INVVLVRMIM LGYAKSISLI ERGNPSRSLE NVCRWACQQQ KSDPNHAEHH DHAIFLTRQD 360
  361 FGPAGMQGYA PVTGMCHPVR SCTLNHEDGF SSAFVVAHET GHVLGMEHDG QGNRCGDETA 420
  421 MGSVMAPLVQ AAFHRYHWSR CSGQELKRYI HSYDCLLDDP FEHDWPKLPE LPGINYSMDE 480
  481 QCRFDFGVGY KMCTAFRTFD PCKQLWCSHP DNPYFCKTKK GPPLDGTECA AGKWCYKGHC 540
  541 MWKNANQQKQ DGNWGSWTKF GSCSRTCGTG VRFRTRQCNN PTPINGGQDC PGVNFEYQLC 600
  601 NTEECQKHFE DFRAQQCQQR NSHFDYQNTK HHWLPHEHPD SKKRCHLYCQ SKETGDVAYM 660
  661 KQLVHDGTRC SYKDPYSICV RGECVKVGCD KEIGSNKVED KCGVCGGDNS HCRTVKGTFT 720
  721 RTPRKLGYLK MFDIPPGARH VLIQEDEASP HVLAIKNQAT GHYILNGKGE EAKSRTFIDL 780
  781 GVEWDYNIED DIETLHTDGP LHDPVIVLII PQENDTRSSL TYKYIIHEDS VPTINSNNVI 840
  841 QEELDTFEWA LKSWSQCSKP CGGGFQYTKY GCRRKSDSKM VHRSFCEVNK KPKPIRRMCN 900
  901 IQECTHPLWA AEAWEHCSRS CGSSGYQLRT VRCLQPLQDG TNRSVHSRYC LGERPESRRP 960
  961 CAEERTSCPQ GITWRNCSVT CGEGTEVRQV LCRTGDHCDG EKPESVRACQ LPPCNDEPCL1020
 1021 GDKSIFCQME VLARYCSIPG YSELCCESCS KRSGTLPPPY LQEAAEIHSD AIFGPSDLPR1080
 1081 SLVMPTPFLP YYSGSRADKK SLSSVSSVAN PSAYAAFRSS SRASVSFPRK KAQEGGTKTP1140
 1141 VSMPPSSSIK TDHLHSSSPG AAAPSPAITD SIGASPQTRT PKKDGKTISR RHPIRSTASE1200
 1201 R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle