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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109501064
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDSQRQQKH YGITSPISLA CPKEIDHIYT QKLIDAMKPF GVFEDEEELN HRLVVLGKLN  60
   61 NLVKEWISDI SESKNLPPSV VATVGGKIFT FGSYRLGVHT KGADIDALCV APRHVERSDF 120
  121 FQSFFEKLKH QDGVRNLRAV EDAFVPVIKF EFDGIEIDLV FARLAIQTIS DNLDLRDDSR 180
  181 LRSLDIRCIR SLNGCRVTDE ILHLVPNKET FRLTLRAVKL WAKRRGIYSN MLGFLGGVSW 240
  241 AMLVARTCQL YPNAAASTLV HKFFLVFSKW EWPNPVLLKQ PEESNLNLPV WDPRVNPSDR 300
  301 YHLMPIITPA YPQQNSTYNV STSTRTVMVE EFKQGLAVTD EILQGKSDWS KLLEPPNFFQ 360
  361 KYRHYIVLTA SASTEENHLE WVGLVESKIR VLVGNLERNE FITLAHVNPQ SFPGNKEHHK 420
  421 ANNYVSMWFL GIIFRRVENA ESVNIDLTYD IQSFTDTVYR QANNINMLKD GMKIEATHVK 480
  481 KKQLHHYLPA EILQKKKKSL SDVSRSSGGL QSKRSSLDSN CLDSSRDTDS GTPFNSPGSA 540
  541 HKPSNPDSPT GDAERSNAEP MAVIVEKLPS VPPAQGLSIP VIGAKGDAAV KAVSSPAVCT 600
  601 IPTVVGRSVI PRVTTPHNPV QGQPHLNGIS NITKNVTPKR SHSPPTDGTA KRLKDIEKFI 660
  661 RLESAFKESR AAEDRKRKPM DAIGGESMPI PTIDTSRKKR LPSKELPDSS SPVPASNIRV 720
  721 IKNSIRLTLN R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle