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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157821825, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKAAALSRG GGCAGRSRGL SSLFTVVPCL SCHTAAPGMN SSTLGSGPAP KPQFQPVQAP  60
   61 ERELLSEQVC QPISEPRSEP GSQTTFVPQP LGAGQESESL GLWPGSGPNT KASPELPSPP 120
  121 RSTAESLPKP ESKAGPKTQS VLRPGQSKTS AGSPVSGTSV PMVSPPLDSY KGWLFKWTNY 180
  181 LKGYQRRWFV LGNGLLSYYR NQGEMAHTCR GTINLASAHF ETEDSCGILL CNGARTYHLK 240
  241 ASSEVDRQQW ITVLELAKAK AIRVMNTQSD DSGDDDEEPA APADNSDLHH TLKTLSLKLD 300
  301 DLGTCNDLIA KHGAALQRSL NELDSLKIPS ESGEKLKVVN ERATLFRITS NAMINACKDF 360
  361 LELAEIHSRK WQRALNYEQE QRVHLEETIE QLAKQHNSLE RAFCNTPGGP ASSSKSFSEG 420
  421 SFLTSKGENS EEDEDTEYFD AMEDSTSFIT VITEAKEDRK PEGGPGTTSV DWTSADNVLD 480
  481 GASFMPKDSC KVKRRVRIPD KPNYSLNLWS IMKNCIGREL SRIPMPVNFN EPLSMLQRLT 540
  541 EDLEYHHLLD KAVNCTSSVE QMCLVAAFSV SSYSTTVHRI AKPFNPMLGE TFELDRLEDM 600
  601 GLRSLCEQVS HHPPSAAHHV FSKHGWSLWQ EITIASKFRG KYISIMPLGA IHLEFQASGN 660
  661 HYVWRKSTST VHNIIVGKLW IDQSGDIEIV NHKTKDRCQL KFVPYSYFSK EAARKVTGVV 720
  721 SDSQGKAHYV LSGSWDEQME CSKIVHSSPS SDGKQKTVYQ TLPAKLLWRK YPLPENAENM 780
  781 YYFSELALTL NEQEEGVAPT DSRLRPDQRL MERGRWDEAN TEKQRLEEKQ RLNRRRRLES 840
  841 CTAGCGGEEE KESDGYSPLW FEKRLDPLTG EMACIYKGGY WEAKEKKDWH MCPNIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle