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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109500290
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVFKAWLGV ALALAEFAVL PHCEGACLYR GSLLADATIW KPDSCQNCRC HGDIVICKPV  60
   61 VCKNPRCAFE KGEVLWIAPN QCCPQCAPRT PGSCHHEGKI REHGTEWASG PCTLCSCTYG 120
  121 EVRCSHQQCT PLSCGPQELE FLAEGHCCPI CVGTGKPCSD DGHVFQDGED WPLSHCAKCV 180
  181 CRNGLTQCFT AQCQPLFCNQ DEIVVRVPGK CCSQCSSRSC STAGQVYEHG EQWKEDACTL 240
  241 CMCDQGQVRC HKQACPPLRC AKGQSKARHH GQCCEECVSP VRSCSSGGVL RYQDEMWKGS 300
  301 ACEFCVCDQG QVTCQTGECA KVACAPGEEL VHLEGKCCPE CISRNDYCVY EEKAEIMSSN 360
  361 SSEIKHVPEG KKWEEGPCKL CECREAQVTC YEPSCPPCPV ATLAMAVKGQ CCPDCTPVHC 420
  421 HPDCLTCSHS PEHCDLCQDP TKLLQNGRCV PSCGLGFYQA GSLCLACQPQ CSTCTSSLEC 480
  481 SSCLPPLLMQ QGQCVSTCGD GFYQDHHSCA VCHESCAGCW GPTEKHCVAC RDPLLVLRDG 540
  541 SCENTCGNGF YNRQGTCVAC DQSCKSCGPS SPRCLTCAEK TVLYDGTCIS ECPRGYYADA 600
  601 TGRCKVCHVS CASCSGPAAA HCTACVHPQV LRQGHCLPSC GGGFYPDHGI CGACHGSCHT 660
  661 CVGPEPTHCT QCKKPEAGLQ VEQHSGENVP YGKCVSQCGA HFYLESTGLC EACHPSCLLC 720
  721 EGKSPRNCTG CGPAHVLLAG RCLSQCPETH FNQEGTCTEC HPSCRQCHGP LESDCVSCHP 780
  781 HLTLSSGRCK ASCKDEQFLN LVGYCADCHP LCQHCVANLQ DTGSVCLKCQ HARHLLLGDH 840
  841 CVPDCPPGHY KERGTCKRCH PSCRSCQNGG PFSCSSCNTG LVLTHIGACS STCFPGHYLD 900
  901 DNQACQPCNR HCRSCDSQGS CTSCRDPSKV LLFGECQYES CAPQYYLDIS TKTCKECDWS 960
  961 CNACTGPLRT DCLQCMDGYV LQDGVCVEQC SPQHYRDSGS CKRCDSHCLQ CQGPHECTRC1020
 1021 EGPFLLFRAQ CVQECAKGYF ADHAEHKCTA CPQGCLQCSH KDRCHLCDHG FFLKSGFCMP1080
 1081 TCVPGFSGHS SNETCTDKVY TPSLHVNGSL TLGIGSMKPL DFSLLNIQHQ DGRVEDLLFH1140
 1141 IVSTPTNGQL LLSRNGKEVQ LEKAGHFSWK DVNGKKVRFV HSKEKLRKGY FSLKISDQQF1200
 1201 FFEPQLINIQ AFSTQAPYVL RNEVLHISKG ERAAITTQLL DIRDDDNPQD VVLNVLDPPR1260
 1261 HGQLLRTPPA PAASVYQFHV DELSRGLLLY AHDGSDSTSD IIVFQANDGH SFQNILFRVK1320
 1321 NVPKNGKKLS RNTGAVYWAP EIKLASCVRV TGGYVQLETP GPSADRFLQL IKKECWEGVM1380
 1381 SPACFPQRSD SMACASLGEV VLLMNLPADS PAGPAEEGHH LPDGRMTTPV STFSQQDIDD1440
 1441 GIVWYRHSGA TAQSDSFHFQ VSTATNAQEH PQSHMFNIAI LPQALEAPKL SLGTSLHMTA1500
 1501 REDGLSVIHP QSLSFGKAES PSGKIIYNIT VPLHPNQGVI EHRGRPNSPI RYFTQEEINQ1560
 1561 GQIMYRPPAA PPHLQEFMAF SFAGLPESVR FYFTVSDGQH TSPEMALTIH LLHSDRQPPA1620
 1621 FQIKAPLLEV SPGGRTPLGL QLVVRDAEVV PEELFFQLQK PPQHGMLMKY TAKSSVTMSA1680
 1681 GDTFTYDEVE RNVLQYVHDG SPAWEDNMEI SVTDGLTVTT SEVKVEVSPS ENREPRLAPG1740
 1741 SSLSMTVASQ HTAIITRSHL AYVDDSSPDS EIWIQLSSLP LYGVLLKTSG PDMEELSGDS1800
 1801 NFTMEDINSK NIRYSAVFET EGQSVTDGFH FSVSDMDNNR VDNQVFTITV TPAENPPHII1860
 1861 AFADLITVDE GGRAPLSLHH FFATEDQDNL QGDAVIKLSA LPKYGCIENT GTGDRFGPGA1920
 1921 NSELEASFPI QDVLENYIYY FQSVHESIEP THDVFSFYVS DGSGRSEIHS INITIERKND1980
 1981 EPPRMTLRPL GVRLSSGVAI SNSSLSLQDL DTPNNELIFV LMKKPDHGYL LLRPTASDPL2040
 2041 ENGTVLDQGS SFTYQDILAG LVGYLPGDIY MAVDEFRFSL TDGLHVDTGR MEIYIELPTS2100
 2101 NIPHLAINRG LQLSAGSVAR ITEQHLRATD TDSEAGQLVY IVKEDPGAGH LQMTKADKLE2160
 2161 QISVRGPIRS FTQADVSQGQ IEYSHGPGEA GGSFAFKFDV VNGEGNKLAD QSFSINVLED2220
 2221 KSPPVIITNK GLVLDENSVE KITTAQLLAT DQDSKPTELI YRITSQPQLG HLEHVASPGI2280
 2281 QISSFTQADL TSRNVQYVHS SGTGKLSDAF SFVLSDGLHE VTQTFSITIH PVDDSLPLVQ2340
 2341 NRGMRVQEGV RKTITEFELK AVDVDTEAES ITFTIVQPPR HGTIERTARG QRYQLTSSFT2400
 2401 MEDIYQNRVS YSHDGSNSLK DRFTFTVSDG TNPFFIIEEG GEEIMTAAPQ QFLVDILPVD2460
 2461 DGTPRIVTNL GLQWLEYMDG KATNLITKKE LLTVDPDTED SQLTYEVTTG PMHGYVENKL2520
 2521 QPGRVAATFT QEHVNLGLIR YVLYEEKIQK MMDSFQFLVK DSKPNVVSDN IFYIHWSLIS2580
 2581 FKYTSYNVSE KAGSVSVMVQ RTGNLNQYAI VLCRTEQGTA SSSSRVSSHP GQQDYVEYAG2640
 2641 QVQFDEREDT KSCTIVINDD DVFENIESFT VELSMPAYAL LGEFTQAKVI INDTEDEPTL2700
 2701 EFDKKTYRVN ESAGFLFAPI KRQGDPSSAV SAICYTVPKS AMGSSLYALE SGSDFKSRGR2760
 2761 SVESRVLLGP GVTTSTCDVM VIDDSEYEEE EEFEIALADA SNNARIGRLA VAKVLISGPN2820
 2821 DASTVSLGNT AFTISEDAGT VKVPVIRHGT DLSTFTSVWC ATRPSDPASA TPGVDYVPSS2880
 2881 RKVEFGPGVT EQYCTLTILD DTQYPVIEGL ETFVVFLSSA QGAELTKPSQ AVIAINDTFQ2940
 2941 DVPSMQFSKD LLLVKEKEGV LHIPIIRSGD LSYESSVRCY TQSHSAQVME DFEERRNADS3000
 3001 SRITFLKGEK AKNCTVYIHD DSMFEPEEQF RVYLGHPLGN HWSGARIGKN SMATVTISND3060
 3061 EDAPTIEFEE AAHQVREPAG PDATAVLSVK VIRRGDQNRT SKIRCSTRDG SAQSGVDYYP3120
 3121 KSRVLKFSPG VDHIFFKVEI LSNEDREWHE SFSLVLGPDD PVEAVLGDVT TATVTILDQE3180
 3181 AAGSLILPAP PIVVTLADYD HVEELSKEGV KKAPSPGYPL VCVTPCDPHY PRYAVMKERC3240
 3241 SEAGINQTSV QFSWEVAAPT DGNGARSPFE TITDSTPFTS VNHKVLDSIY FSRRFHVRCV3300
 3301 AKAVDKVGHV GTPLRSNVVT IGTDSAICHT PVVAGTARGF QAQSFIATLK YLDVKHKEHP3360
 3361 NRIHISVQIP HQDGMLPLIS TMPLHNLHFL LSESIYRQQH VCSNLVTARD LRGLSEAGFL3420
 3421 DDAGLHSTAL GPGYDRPFQF DPSVREPKTI QLYRHLNLKS CVWTFDAYYD MTELIDVCGG3480
 3481 SVTADFQVRD SAQSFLTVHV PLYVSYIYVT APRGWASLEH HTEMEFSFFY DTVLWRTGIQ3540
 3541 TDSVLSARLQ ILRIYIREDG RLVIEFKTHA KFRGQFVIEH HTLPDVKSFI LTPDHLGGIQ3600
 3601 FDLQLLWSAQ TFDSPHQLWR ATSSYNRKDY SGEYTIYLIP CTVQPTQPWV DPGEKSLACT3660
 3661 AHAPERFLIP IAFQQTNRPV PVVYSLNTEF QLCNNEKVFL MDPNTSDMSL AEMDYKGAFS3720
 3721 KGQILYGRVL WNPEQNLHSA YKLQLEKVYL CTGKDGYVPF FDPTGTIYNE GPQYGCIQPN3780
 3781 KHLKHRFLLL DRSQPEVTDK YFHDVPFEAH FASELPDFQV VSSMPGVDGF TLKVDALYKV3840
 3841 EAGHQWYLQV IYIISPDSIS RPRVQRSLTA SLRRHQRDLV DPSGWLSLDD SLIYDNEGDQ3900
 3901 VKNGTNMKSL NLELQEPVIA ASLSQSGASI GSALAALMLL LLLFLVACFI TRKCQKQKKK3960
 3961 QPPEDTLEEY PLNTKVDVAK KNTDKGEKNA NRQYCTVRNV NILSDSEGYY TFKGAKVKKL4020
 4021 NLEVRVHNNL QDGTEV

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