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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109497259, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRGSRIRTS RVTPLAGRAP QMRAAPRRAP AAQPPATAAA PSAVGSPAAA PRQPGLMAQM  60
   61 ATTAAGVAVG SAVGHTLGHA ITGGFSGGAN AEPARPDITY QEPQGAPLQN QQSFGPCSLE 120
  121 IKQFLECAQN QSDVKLCEGF NEVLRQCRIA NVDHPPTVDH GEKNVKRRKY NEGFLQYGFT 180
  181 SAITAGTERP QCVICGVVLS AESMKPNKLK RHFESKHSSF ANKDTNYFRS KADGLKKARF 240
  241 DTGSKTYKQN VAAVEASYLV ALRIARDMKP HTFAEHLLFP VAKDSVRVMI GDEFVTKLSA 300
  301 VSLSNDTVRR RIHDMSADIL DQVIQEIKSA QLPAFSIQLD ESTDVANCSQ LLVYVRYIKD 360
  361 GDFKDEFLFC KPLERTTTAL DVFEAVGSFL RQHKISWESV CGVCTDGAPA TLGCQSGFQR 420
  421 LVLNESPKAI GAHCMMHLQT LAMKTLPQDL QDVMKSVLSS VSFIKASSLN SRLFLQLCSD 480
  481 LDAPSKALLL HTEGRWLSRG KVLKRIFELR DELKMFFNQK AIRQFEALFS DKSELQKIAY 540
  541 LVDIFTILNE LNLSLQGQNS SCLDLSEKIQ SFQMKLQLWQ KKLDENKIYM LPTLSAFFEE 600
  601 HDVEPHKRTT VVTSVKEHLD MLAGEISWYF PNLPDVPFAL ARNPFTVKAE DVPKTAQDEF 660
  661 IELTNSDAAR ANFSTMPVTQ FWVKCLQSYP ILSETVLRLL LPFATTSLCE TGFSSLLVIK 720
  721 SKYRSRLVVE DDLRCALAKT TPRISDLVRK KQSQPSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle