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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109497239, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPPLDVWDF SSPLLSLWMN RFYIYMGCAL GVTLWFCVQI IIKKQVTRSQ EKSVPGAPDS  60
   61 SLSPQEKHTH VSGVKIFYGS QTGTAKGFAV VLAKAVTSLD LPVAIINLKE YDPDDNLIGE 120
  121 ITSKNVCAFL VATYTDGRPT ESAEWFCKWL EEAANDFRFG KTYLKGLRYA VFGLGDSAYR 180
  181 SHFNKVSTNV DKWLWMLGAQ RVLTRGEGDC NAVQSKHGSI EADFTAWKTK FISRLQALQR 240
  241 GEKKGCGGDC KRGKCESAQH GPGEVRSHPH GELHPGDAEE EEPCESSSED EHGTKGYQSL 300
  301 NSVVDVEDLG NIMNPVKREK REKAQPEEKV VVHRNSEKNE DSEARAMITP ALREALTKQG 360
  361 YQLIGSHSGV KLCRWTKSML RGRGGCYKHT FYGIESHRCM EATPSLACAN KCVFCWRHHT 420
  421 NPVGTEWRWK MDQPELILKE AIENHRNMIK QFKGVPGLKA ERFEEGMEVK HCALSLVGEP 480
  481 IMYPEINRLL KLLHQHGIST FLVTNAQFPE EIRNLTPVTQ LYVSVDASTK DSLKKIDRPL 540
  541 FKDFWQRFLD SLQALSAKQQ RTVYRLTLVK CWNVDELQAY AELVSLGSPD FIEVKGVTYC 600
  601 GESAASSLTM ANVPWHEEVV RFVRELVDLL PDYEIACEHE HSNCLLIGHK KFKIGGEWWT 660
  661 WIDYSRFQEL VLQYEESGGS KTFSSKDYMA RTPQWALFGA RERGFDPKDT RYQRKNKTKD 720
  721 ISGC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle