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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109499222
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWGLHPHGP GTAALTAAGS LWGPARFPSR LGCLGMTRRL VVRSVAGADS PQSSPKSGRY  60
   61 RDTVLLPQTN FPMKLLGHQQ SDMELEIQQK CGFSELYSWQ RERKVKTEFC LHDGPPYANG 120
  121 DPHVGHALNK ILKDIVNRFH MMRGSKVHFV PGWDCHGLPI ETKVLSELGV NTQTLSAMEI 180
  181 REKARSFAQA AIEKQKSAFA RWGVMADWSN CYYTFDPKYE AKQLRVFQQM YEKGLVYRSY 240
  241 KPVYWSPSSR TALAEAELEY NPEHVSRSVY VRFPLLKPPP TLESLTGASS PVSALVWTTQ 300
  301 PWTVPANQAI CYMPEAKYAV VKCSASGNFY ILAEDKISPV ASALETTFDV TATFSGVDLE 360
  361 GGTCSHPLIP DKVSPLLPAT HVTMAKGTGL VHTAPAHGME DYSVASQHSL PMVLWADTQV 420
  421 LCSQLASEAL VSLACLFTGL IIRVLSRAQC RSLCFYTCVQ WAYDSRIRKS QHSSLKYVLL 480
  481 LPLDLLMNDL QESLKTVKFI PGAALNSMMD MLDRRPYWCI SRQRVWGVPI PVFHHKTKDE 540
  541 YLINSQTTEH IIKLVEQHGS DVWWTLPAEK LLPEEVVAQA GGPGALEYVP GQDILDIWFD 600
  601 SGTSWSCVLQ GTEQRADLYL EGKDQLGGWF QSSLLTSVAT RSKAPFRTVM VHGFTLGEKG 660
  661 EKMSKSLGNV IDPDTIISGG KDHSKEPPYG ADILRWWIAE SNVFTEVTIG PSVLSAARDD 720
  721 ISKLRNTLRF LLGNLAGFNP ETASVPVKNM YIIDQYMLHL IQDFATKVTD SYKQYDFGKV 780
  781 VRLLKAFYTR ELSSFYFSIV KDRLYCESET DPKRRSCQTA LAEILDVLVR SFAPVLPHLA 840
  841 EEVFQHIPYV KEPKSVFRTG WISTSSVWKK PGLEEAVESA CAMRDSFLGS IPGKNAAEYD 900
  901 VIIVIEPGLL FEIMEMLQAE ETSSTSQLNE LMMASQTTLL AQEPRERSAD AIELTGTFVI 960
  961 NLEGGDIREE SSYKVIVVPT AREKCPRCWK HTAETADALC PRCAEVIGAK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle