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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|109498329, gi...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGKHRSPHT VSGRPAQWLS PGIFCLGLTF LLGWVGLLQG HPQCLDYGPP FRPPLHLEFC  60
   61 SDYDSFGCCD RRKDRRIAAR YWDIMNYFDL KGHELCGGYI KDILCQECSP YAAHLYDAEN 120
  121 PQTPLRNLPG LCSDYCSAFH HNCHSAISLL TNDRGLQESH GKDGARFCHL LNLPDEDYCF 180
  181 PNVLRNDQLN RNLGVVAEDH QGCLQLCLAE VANGLRNPVS MVHAGDGTHR FFVAEQVGVV 240
  241 WVYLPDGSRL EQPFLDLKSM VLTTPWIGDE RGFLGLAFHP KFRHNRKFYI YYSCLGKRKV 300
  301 EKIRISQMKV SLSDPNKADP KSERVILEID EPASNHNGGQ LLFGLDGYLY IFTGDGGQAG 360
  361 DPFGKFGNAQ NKSSLLGKVL RIDVNGAGMS AQRYRVPLDN PFVSEPGAHP AVYAYGVRNM 420
  421 WRCAVDRGDP VTRQGRGRIF CGDVGQNKFE EVDLIVKGGN YGWRAKEGFE CYDKNLCHNA 480
  481 SLDDILPIYA YGHGVGKSVT GGYVYRGCES PNLNGLYIFG DFMSGRLMAL QEDRKTQKWS 540
  541 KRDICLGNSS CAFPGLISAY SKFIISFAED EAGELYFLAT SYPSAYAPHG SIYKFVDPSR 600
  601 RAPPGKCKLK PVPVRAKSKK IRFRPRAATV LDSMKEESQK AAGKPSTSTL ASSSDRAAPQ 660
  661 RGSPKKPASP PSSKKTFQRP STKKKSRMWS PGPQGKRKQS QATRKSPGRS HP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle