YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109498249, gi...
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGCEQALAA EFKSKDPFAH LPKSTFVVDE FKRKYSTEDT LSVVLPYLWE HFDKDGWSLW  60
   61 CAEHRFPEEL TQTFMSCNLI RGMFQRLDKL RRNTFACVIL FGANNSSSIS GVWVFRGQEL 120
  121 IFPLSPDWQV DYESFTWWKL DPGSKETQTL V

Type	Start	End	Confidence
Cytoplasmic	1	92	0.79
Transmembrane Helix	93	115	0.74
Non-Cytoplasmic	116	151	0.98